Pairwise Alignments

Query, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

Subject, 393 a.a., Predicted SAM-dependent methyltransferases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  164 bits (414), Expect = 5e-45
 Identities = 123/386 (31%), Positives = 202/386 (52%), Gaps = 28/386 (7%)

Query: 12  SLKNFSNIIYKNAIVNKDDFSKTEEIVDI-TYNGNFVAKALYDPKFPLIKILTRENEEID 70
           SLK   + ++  AI +     K  ++V + ++   F+    Y      ++I++ E +EI+
Sbjct: 16  SLKRRHHWVFSGAIAHTAPDLKNGQLVSVFSHRQEFLGTGHYQKGSITVRIISFEPKEIN 75

Query: 71  KDFFFKRINNANNYRTDI----LNYKDTYRMIYAEADYLPSIILDKYNKIASIQISSKIM 126
             F+ +++ NA   R  I        + YR+++ E D LP +I+D Y+  A +Q  S  M
Sbjct: 76  AAFWEEKLQNAYEMRAKIGLADNPATNVYRLVHGEGDQLPGLIIDHYHGTAVLQTHSVGM 135

Query: 127 DNYSDLIFECISEITDVETMYVQSGK----KGSDVKTKIFGDKSQ------IETVISEGN 176
             + + I       T ++T+Y +  K    K ++    + G ++Q      +  V+ E  
Sbjct: 136 YQHREEIS------TALQTVYGEKLKAVYDKSAETLKGLAGIENQFLYGAPLTNVVLENG 189

Query: 177 AKFNVNM-KGHKTGFFLDQRDNRIDLENYVKPGDKVLDICSYTGGFAVHAGIKGG-EVTA 234
            K+ ++  KG KTGFF+DQR+NR  L  Y + G KVL+   Y+GGF++ A   G  EV +
Sbjct: 190 CKYEIDWEKGQKTGFFIDQRENRKLLGTYSQ-GKKVLNTFCYSGGFSIAALEAGAAEVHS 248

Query: 235 VDLSEKALAVAEENMELNRVKNYNCMVSNAFDAMKEMIKNNEKFDVVVLDPPAFTDSSKD 294
           VD+S KA+ + E+N++LNR  +     S   D +K + +  + +DV+VLDPPAF  + K 
Sbjct: 249 VDISAKAIELTEKNLQLNRQFDGK-HASKVADVVKYIREIEQDYDVIVLDPPAFAKNMKA 307

Query: 295 IKNALNAYNSMNYLGLKLAK--RILVTCSCSHHIDRESFKHTIVSSSLRAKKEIRQIGSY 352
             NA+ AY  +N   LK  K   IL T SCS  +D++ F HTI ++++   + +R I   
Sbjct: 308 RHNAVQAYKRLNAEALKHIKPGGILFTFSCSQVVDKQLFAHTITAAAIEVGRSVR-ILQQ 366

Query: 353 RTQAPDHIITMANKDLEYLKCLFFNV 378
            TQ  DH I   + + EYLK L   V
Sbjct: 367 LTQPADHPINAFHTETEYLKGLVLYV 392