Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 1207 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  143 bits (361), Expect = 4e-38
 Identities = 90/293 (30%), Positives = 158/293 (53%), Gaps = 6/293 (2%)

Query: 345 EQLKQGAEWVSNGRYDQKVIVDSDDEFGELAKAFNKMATQINISDDKLKKHAEELKISYN 404
           EQL + ++ ++    + +V     DE         + + ++    + L+   ++++    
Sbjct: 475 EQLHERSQRLAASEEELRV---QADELQASNDVLRRSSQEMTAQKELLEALNQQMEARAG 531

Query: 405 ELKELDKLKSELIAVVSHELRTPLTSIKGYVELVLDGTMGAINDSQKKCLQVADDNIVRL 464
           EL   ++ KS+ +A +SHELRTPL S+    + + +   G ++  Q +   +   +   L
Sbjct: 532 ELLRANEYKSQFLANMSHELRTPLNSLLILSQDLAENRTGNLDADQVEAASIIHSSGSNL 591

Query: 465 RRLIESMLDLSKIERGELEMYREKVNLRSIVCDVIEYLKPLATEKNIKLNKEVEDIA--I 522
            RLI  +LDLSK+E G++E+  E V + S+   +    + LA E+ ++L   V D    +
Sbjct: 592 LRLINDILDLSKVEAGKMEVVYEPVKVASVAQRLERNFRRLAQERKLRLAVSVTDAPELV 651

Query: 523 EADKDRITQVLTNLIENAIKFSPANE-SILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIF 581
             D  ++ Q+LTNL+ NA+KF+     S+  S     + + + V D G GIP+  +  IF
Sbjct: 652 FTDPGKLDQILTNLVGNALKFTMQGRVSVTFSKDEAGKTLKVAVADSGIGIPEDKLGAIF 711

Query: 582 NRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGKGSTFHIILPI 634
             F QVD+ST+R+ GG+GLGLA+ + +     GS+ VES LG+GSTF + +P+
Sbjct: 712 EAFEQVDASTRRQFGGTGLGLAITQRLARLLGGSVTVESALGQGSTFTLEIPV 764