Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 917 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  157 bits (398), Expect = 2e-42
 Identities = 111/376 (29%), Positives = 186/376 (49%), Gaps = 30/376 (7%)

Query: 283 AYEPIYDSDNKIIGMLFVGTPESKFLALQADVRNQTFVVGLIGLLIALIVSYLINRGIIK 342
           A E I D  ++++G + V    +  L         + ++  IGL+    ++  I+R I  
Sbjct: 137 AGELIPDEADRLLGWVEVELSHNGMLLRGYRSLFASLLLIAIGLICTAALALRISRTINS 196

Query: 343 PLEQLKQGAEWVSNGRYDQKVIVDSDDEFGELAKAFNKMATQINISDDKLKKHAE----- 397
           P+ Q+KQ    + +G  + ++      E  +LA   N+MA  +  + ++L+   +     
Sbjct: 197 PIGQIKQAVAQLKDGNLETRLPPLGSQELDQLASGINRMAETLQNAQEELQHSIDQATED 256

Query: 398 -------------ELKISYNELKELDKLKSELIAVVSHELRTPLTSIKGYVELVLDGTMG 444
                        EL ++  E  E  ++KSE +A +SHE+RTPL  I G+  L+    + 
Sbjct: 257 VRQNLETIEIQNIELDLARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSELT 316

Query: 445 AINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSIVCDVIEYLKP 504
                    ++ + DN++ +   I  +LD SKIE G+L +     NLR ++ D +  L P
Sbjct: 317 PRQLDYLGTIEKSADNLLGI---INEILDFSKIEAGKLVLDSIPFNLRDLLQDTLTILAP 373

Query: 505 LATEKNIKLNKEV---EDIAIEADKDRITQVLTNLIENAIKFSPANESILVSGVLEDEH- 560
            A  K ++L   V     +A+  D  R+ Q+LTNLI NAIKF+    +I+   ++EDE  
Sbjct: 374 AAHAKQLELVSLVYRDTPLALVGDPLRLKQILTNLISNAIKFTREG-TIVARAMIEDEQE 432

Query: 561 ----IHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSI 616
               + + V D G G+  +D+  +F  F Q D+S  R+ GG+GLGL + K ++E   G I
Sbjct: 433 DSVQLRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEI 492

Query: 617 WVESELGKGSTFHIIL 632
            V+S  G+GS F I L
Sbjct: 493 GVDSTPGEGSEFWISL 508