Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  157 bits (398), Expect = 2e-42
 Identities = 102/333 (30%), Positives = 172/333 (51%), Gaps = 30/333 (9%)

Query: 326 LLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQKVIVDSDDEFGELAKAFNKMATQI 385
           L ++ +++  ++R I  P+E++K     + +G  ++++      E  ELA   N+MA  +
Sbjct: 181 LALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGINRMAETL 240

Query: 386 NISDDKLKKHAE------------------ELKISYNELKELDKLKSELIAVVSHELRTP 427
             + ++L+   +                  EL ++  E  E  ++KSE +A +SHE+RTP
Sbjct: 241 QNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTP 300

Query: 428 LTSIKGYVELVLDGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYRE 487
           L  I G+  L+    M          ++ + DN++ +   I  +LD SKIE G+L +   
Sbjct: 301 LNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGI---INEILDFSKIEAGKLVLDSI 357

Query: 488 KVNLRSIVCDVIEYLKPLATEKNIKLNKEV---EDIAIEADKDRITQVLTNLIENAIKFS 544
             NLR ++ D +  L P A  K ++L   +      ++  D  R+ Q+LTNL+ NAIKF+
Sbjct: 358 PFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFT 417

Query: 545 PANESILVSGVLEDEH-----IHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSG 599
               +I+V  +LEDEH     + + V D G G+  +D+  +F  F Q D+S  R+ GG+G
Sbjct: 418 REG-TIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTG 476

Query: 600 LGLAVCKSIVEAHKGSIWVESELGKGSTFHIIL 632
           LGL + K ++E   G I V+S  G+GS F I L
Sbjct: 477 LGLVISKRLIEQMGGEIGVDSTPGEGSQFWISL 509