Pairwise Alignments

Query, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

Subject, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

 Score =  242 bits (617), Expect = 5e-68
 Identities = 145/410 (35%), Positives = 235/410 (57%), Gaps = 25/410 (6%)

Query: 8   KRLGTKLIIYSIITALIPIVMLGAVSTDTINTEMTKQAQEKINDDLNTAESVVNLKLDKI 67
           K++GTKL+I+SIIT +IPI +LG VS +TI  +M +Q+ +K+      A ++++ +  ++
Sbjct: 6   KKIGTKLLIFSIITVIIPIAILGIVSNNTITQDMKEQSADKLESSNEMANTIMDSRFTEL 65

Query: 68  SSLNKYIISNDNTITSLKNNNTAELKTLAISYKNTSAPDFVVFFDGQGNVVARSNSD-VT 126
            +L +Y        TS+K  N  +L+  A + K+ S  D V+F    G+ +A S+ + +T
Sbjct: 66  CTLAEYASYTQGVKTSIKTGNVDDLELRAETLKSASNADLVIFTGNGGSTIASSSGEGIT 125

Query: 127 GDNSYEDLFKKVVNSTGYTSIEVLDKDSIKYENVGELVNIDIKGTEDSINYSDSVQDSAM 186
            D++   + K    S G+  I   ++ ++K+ +       D+ GT           DSA+
Sbjct: 126 LDSTILKVSKSSEKS-GFEKIP--EQTALKFSDA------DVTGT-----------DSAL 165

Query: 187 ALVSIEPIYDKNGKLLGAAMAADILNKDYSIVDTVKDASKDATTIFLDGVRVSTNVQDNG 246
           ++V   PIYD  G L G     D+LN D+++VD++K ++ D +T+FL+  R+ST+V    
Sbjct: 166 SIVVAYPIYDDAGTL-GYVAFIDVLNNDHTLVDSIKASTGDESTLFLENYRISTSVVSGN 224

Query: 247 GRAIGTLVSEEVYNHVVLDGKTYYGRAFVVNEWYLTAYEPIYDSDNKIIGMLFVGTPESK 306
            RA+GT  S+ VYN VV +   + G A VV + +LT Y P+ DS+   IGM+FVGTPE++
Sbjct: 225 SRAVGTTASDVVYNTVVKENTEFMGSANVVGQSFLTKYVPLKDSNGATIGMVFVGTPEAQ 284

Query: 307 FLALQADVRNQTFVVGLIGLLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQKVIVD 366
           F  L  + RN T ++ L GLLIA+++S + +R I KP+ QL+ G     +G YD  + V 
Sbjct: 285 FTQLVNNARNNTIIIALFGLLIAVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVK 344

Query: 367 SDDEFGELAKAFNKMATQINISDDKLKKHAEELKISYNELKELDKLKSEL 416
           + DE  ELA +FNKMA  I      L   A++L ++   LKE+  +   L
Sbjct: 345 TGDELEELANSFNKMAKDIKELHSML--DADKLSLA-KTLKEIFDIMDHL 391