Pairwise Alignments

Query, 811 a.a., DUF5814 domain-containing protein from Methanococcus maripaludis S2

Subject, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

 Score = 55.8 bits (133), Expect = 8e-12
 Identities = 85/388 (21%), Positives = 152/388 (39%), Gaps = 62/388 (15%)

Query: 224 LITSATSSGKTLIGELAGIKNISEKKGKFLFLVPLVALANQKYVEFKDRYEKEGYSVSLR 283
           L+   T  GK+L  ++ G+     + G  + + PL+AL + +     +        VS  
Sbjct: 36  LVLMPTGGGKSLCFQVPGLL----RPGLTVVVSPLIALMDDQVATLDE------LGVSAA 85

Query: 284 VGTGRLSENKGGGINSSLDSDIIIGTYEGIDYLIRSGKLK-----DVGTVVIDEVHSMNM 338
                L+  +   +   L    +   Y   + L++   L      D+    IDE H ++ 
Sbjct: 86  ALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPRMLDFLRDLDISLFAIDEAHCVSQ 145

Query: 339 DERGARLDGL-IGRLRYLFT-CQMIYLSATVG--NPEELASKLGSKLVLYNGRPVPLERH 394
                R + L +G+L  LF     I L+AT      EE+  +L  +           ER 
Sbjct: 146 WGHDFRPEYLQLGQLAELFPHVPRIALTATADMRTREEIVQRLHLQ---------GAERF 196

Query: 395 LIFTKNDYGKLNLVNDIVKQEFSSKSKYGFRGQ-----SLIFTFSRKRAEYISNYLNTKG 449
           L    + + + N+   IV +E   K    F G+      +++  SRK+ +  + +L ++G
Sbjct: 197 L----SSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKKVDETAAFLCSQG 252

Query: 450 IKSDYYHGGMEYSKRRTVEDNFLKQKTMCVVTTAALAAGVD-----FAASTVVLESLAMG 504
             +  YH G+    R   +  FL ++ + +V T A   G+D     F A   + +SL   
Sbjct: 253 FPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDLPKSL--- 309

Query: 505 GDWLNPSEFQQMCGRAGRKGM-HDKGKVYSLVEIGKKYHAKMENSEDEVSFKLLNSEPEE 563
                   + Q  GRAGR G+  D    Y L ++       ++NSE +   K +     +
Sbjct: 310 ------EAYYQETGRAGRDGLPSDAWMAYGLQDM-VMLKQMLQNSEGDERHKRIEQHKLD 362

Query: 564 VSLEYSEDEE---------FEQVLANVC 582
             L   E+           F+++L   C
Sbjct: 363 AMLALCEETRCRRQSLLAYFDEILEQPC 390