Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 590 a.a., succinate dehydrogenase from Pseudomonas simiae WCS417

 Score =  279 bits (713), Expect = 2e-79
 Identities = 195/556 (35%), Positives = 287/556 (51%), Gaps = 50/556 (8%)

Query: 4   DVLIIGGGGAAARAAIEC---GQKNVVIASKGLFGKSGCTVMAEGGYNAVL---NEKDSF 57
           D +IIGGGGA  RAA++    G K  VI    +F     TV A+GG    +   +  D +
Sbjct: 10  DAIIIGGGGAGMRAALQLAQGGHKTAVITK--VFPTRSHTVSAQGGITCAIASADPNDDW 67

Query: 58  EKHYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN 117
             H  DT+KG  YI D+  ++ + +  P     L+  G  F R+E     QRPFGGQS +
Sbjct: 68  RWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTEQGRIYQRPFGGQSKD 127

Query: 118 --------RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKK 169
                   RTC + DRTGH ++  L +  N       L +  A+ L+ +   E       
Sbjct: 128 YGKGGQAARTCAASDRTGHALLHTLYQG-NLKAGTTFLNEYYAVDLVKNAQGE------- 179

Query: 170 CFGAVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDM 229
             G + + +  G+   + AK+T+LATGGAG+IY  T+N     GDG  +A R GV + D+
Sbjct: 180 FVGVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDI 239

Query: 230 EMVQFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNE 289
           EM QFHPTG+ G G+LVTE  RGEGG L NK+ ERFM+ Y     +L+ RDVVA+++  E
Sbjct: 240 EMWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKE 299

Query: 290 IQEGRGIDGG---VYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHHFM 345
           I  G G       V L + HL  EV+  +L  +    K    VD    P+ V PT H+ M
Sbjct: 300 IIAGNGCGPNGDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMM 359

Query: 346 GGIKIN----------EDCETNISGLFACGEVA-GGLHGANRLGGNALAETQVFGSIAGR 394
           GG+  N          E  +  I GLFA GEVA   +HGANRLGGN+L +  VFG  AG 
Sbjct: 360 GGVPTNIHGQAITQNAEGEDEIIHGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGL 419

Query: 395 NALNYAEEKIDISKVYD-SVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRD 453
           +      + I+     D ++E  + +L N       G +V +L  EL++ M ++  + R 
Sbjct: 420 HLEKALTDGIEYDDATDANIEAALARL-NALNERTDGEDVATLRRELQSCMQNYFGVFRT 478

Query: 454 ENGLKTALEKINEIAGKKVLINGVVDFS--------KKLELENMVLVSKIVINSALLRKE 505
              ++  + ++ ++  K++    + D S        + LEL+N++ V++    +A +RKE
Sbjct: 479 GEYMQKGIAQLADLR-KRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKE 537

Query: 506 SRGAHFRNDYPKTNEE 521
           SRGAH R D+   ++E
Sbjct: 538 SRGAHAREDFEDRDDE 553