Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 590 a.a., succinate dehydrogenase flavoprotein subunit from Pseudomonas putida KT2440

 Score =  278 bits (711), Expect = 4e-79
 Identities = 196/558 (35%), Positives = 289/558 (51%), Gaps = 54/558 (9%)

Query: 4   DVLIIGGGGAAARAAIEC---GQKNVVIASKGLFGKSGCTVMAEGGYNAVL---NEKDSF 57
           D +IIGGGGA  RAA++    G K  V+    +F     TV A+GG    +   +  D +
Sbjct: 10  DAIIIGGGGAGMRAALQLAQGGHKTAVVTK--VFPTRSHTVSAQGGITCAIASADPNDDW 67

Query: 58  EKHYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN 117
             H  DT+KG  YI D+  ++ + +  P     L+  G  F R+E+    QRPFGGQS +
Sbjct: 68  RWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRPFGGQSKD 127

Query: 118 --------RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKK 169
                   RTC + DRTGH ++  L +  N       L +  A+ L+ ++   +G  +  
Sbjct: 128 FGKGGQAARTCAASDRTGHALLHTLYQG-NLKAGTTFLNEYYAVDLVKNQ---DGAFV-- 181

Query: 170 CFGAVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDM 229
             G + + +  G+   + +K+T+LATGGAG+IY  T+N     GDG  +A R GV + D+
Sbjct: 182 --GVIAICIETGETLYIKSKATVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDI 239

Query: 230 EMVQFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNE 289
           EM QFHPTG+ G G+LVTE  RGEGG L N + ERFM+ Y     +L+ RDVVA+++  E
Sbjct: 240 EMWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKE 299

Query: 290 IQEGRGIDGG---VYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHHFM 345
           I  G G+      V L + HL  EV+  +L  +    K    VD    P+ V PT H+ M
Sbjct: 300 IIAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMM 359

Query: 346 GGIKIN----------EDCETNISGLFACGEVA-GGLHGANRLGGNALAETQVFGSIAGR 394
           GG+  N          +  +  I GLFA GEVA   +HGANRLGGN+L +  VFG  AG 
Sbjct: 360 GGVATNIHGQAITMDADGQDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGL 419

Query: 395 NALNYAEEKIDISKVYDS-VEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRD 453
           +      E ++     D+ V+  + +L N      SG +V SL  EL++ M ++  + R 
Sbjct: 420 HLEKALSEGVEYRDASDTDVDVALNRL-NKLNERTSGEDVASLKRELQSCMQNYFGVFRT 478

Query: 454 ENGLKTALEKINEIAGKKVLINGVVDFSKK----------LELENMVLVSKIVINSALLR 503
              ++  +E   ++AG +  I  V    K           LEL+N++ V++    +A  R
Sbjct: 479 GEYMQKGIE---QLAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEAR 535

Query: 504 KESRGAHFRNDYPKTNEE 521
           KESRGAH R D+   ++E
Sbjct: 536 KESRGAHAREDFEDRDDE 553