Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 601 a.a., Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  286 bits (733), Expect = 1e-81
 Identities = 187/552 (33%), Positives = 291/552 (52%), Gaps = 44/552 (7%)

Query: 4   DVLIIGGGGAAARAAIECGQKNVVIASKG-LFGKSGCTVMAEGGYNAVLNE--KDSFEKH 60
           DV+I+G GG+  RA+++  +  + +A    +F     TV A+GG  A L    +D++  H
Sbjct: 13  DVVIVGAGGSGMRASLQLARAGLKVAVLSKVFPTRSHTVAAQGGIGASLGNMNEDNWHYH 72

Query: 61  YSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN--- 117
           + DT+KG  ++ D+  ++ + + AP     LE FG  FDR+      QRPFGG + N   
Sbjct: 73  FYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIYQRPFGGHTANYGE 132

Query: 118 ----RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFGA 173
               R C + DRTGH M+  L +  N   R     + MA+ LI D   +         G 
Sbjct: 133 KPVQRACAAADRTGHAMLHTLYQQ-NVQARTTFFVEWMALDLIRDASGD-------VVGV 184

Query: 174 VFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMVQ 233
             L++  G+ Y + AK+T+LATGGAG+I+  ++N     GDG  +A R G+ L DME  Q
Sbjct: 185 TALEMETGETYILEAKTTLLATGGAGRIFAASTNAFINTGDGLGMAARAGIPLQDMEFWQ 244

Query: 234 FHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNEIQEG 293
           FHPTG+ G G+L+TE  RGEG IL N N +RFM+ Y     +L+ RD V++ +  EI+EG
Sbjct: 245 FHPTGVAGAGVLLTEGCRGEGAILRNVNGDRFMERYAPTLKDLAPRDFVSRCMDQEIKEG 304

Query: 294 RGIDGG---VYLDVTHLEPEVIKEKLETMFS-QFKLVGVDIRKEPMKVAPTAHHFMGGIK 349
           RG       ++LD+TH+    I ++L +++        VDI K+P+ V PT H+ MGGI 
Sbjct: 305 RGCGPNKDYIHLDMTHIGVNDIMKRLPSVYEIGHNFANVDITKDPIPVVPTIHYQMGGIP 364

Query: 350 IN-------EDCETN---ISGLFACGEVA-GGLHGANRLGGNALAETQVFGSIAGRNALN 398
            N        D + N   ++GL+A GE +   +HGANRLG N+L +  VFG  AG + + 
Sbjct: 365 TNIHGQVVTPDGQGNQKVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAGDHIVQ 424

Query: 399 YAEE-KIDISKVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRDENGL 457
           Y ++ K       D+ +K + +L      +  G     + ++L+  M     + R +  +
Sbjct: 425 YNDKNKTHKPMPADAADKTLARLAR-LDNATDGEYSQDVANDLRTAMQQHAGVFRTQASM 483

Query: 458 KTALEKINEIAGKKVLINGVVDFSK--------KLELENMVLVSKIVINSALLRKESRGA 509
              + KIN +  +   I  + D SK         LE+EN++  ++  + SA  R+E RGA
Sbjct: 484 DEGVVKINAMRARVAKI-ALKDKSKVFNTARIEALEVENLIECAQATMTSAAARRECRGA 542

Query: 510 HFRNDYPKTNEE 521
           H  NDY +  ++
Sbjct: 543 HTVNDYERPADD 554