Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 593 a.a., succinate dehydrogenase flavoprotein subunit from Magnetospirillum magneticum AMB-1

 Score =  257 bits (656), Expect = 1e-72
 Identities = 178/549 (32%), Positives = 269/549 (48%), Gaps = 41/549 (7%)

Query: 4   DVLIIGGGGAAARAAIECGQKNVVIAS-KGLFGKSGCTVMAEGGYNAVLNE--KDSFEKH 60
           DV+++G GGA  RA +  GQ     A    +F     TV A+GG  A L    +D+++ H
Sbjct: 12  DVVVVGAGGAGLRATMGMGQAGFKTACITKVFPTRSHTVAAQGGIGASLGNMAEDNWKWH 71

Query: 61  YSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN--- 117
             DT+KG  ++ D+  ++ + + A      LE FG  F R+   +  QRPFGG   N   
Sbjct: 72  MYDTVKGSDWLGDQDAIEYMCREAVPAVHELEHFGVPFSRTPEGKIYQRPFGGHMSNFGE 131

Query: 118 ----RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFGA 173
               R C + DRTGH ++  L     K +    +E        +D + ENG     C G 
Sbjct: 132 KPVQRACAAADRTGHAILHTLYSQCLKHQCEFFIE-----YFAIDLIMENGA----CRGV 182

Query: 174 VFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMVQ 233
           V  +L +G ++   A   +LA+GG G+ +   ++     GDG  +  R G+ L DME VQ
Sbjct: 183 VAWNLDDGTLHRFRAHKVVLASGGYGRAFFSCTSAHTCTGDGHGLVARAGLPLQDMEFVQ 242

Query: 234 FHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNEIQEG 293
           FHPTG+ G+G L+TE  RGEGG + N   ERFM+ Y     +L++RDVV++A+  EI+EG
Sbjct: 243 FHPTGIYGSGCLITEGARGEGGYVTNSAGERFMERYAPTAKDLASRDVVSRAMTMEIREG 302

Query: 294 RGI---DGGVYLDVTHLEPEVIKEKLETMFSQFKL-VGVDIRKEPMKVAPTAHHFMGGIK 349
           RG+      ++L + HL  E ++ +L  +    K+  GVD+ KEP+ V PT H+ MGGI 
Sbjct: 303 RGVGKEHDHIFLHLEHLGAETLELRLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIP 362

Query: 350 IN----------EDCETNISGLFACGEVA-GGLHGANRLGGNALAETQVFGSIAGRNALN 398
            N          E+ +  + GL A GE A   +HGANRLG N+L +  VFG      A  
Sbjct: 363 TNVYGEVLRPTAENPDATVEGLMAIGEAACVSVHGANRLGTNSLLDIVVFGRACALRAAE 422

Query: 399 YAEEKIDISKVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRDENGLK 458
             +       +            +  + +N   +   +   ++ TM    ++ R    L 
Sbjct: 423 TMKPGTAHKPLPKDGSDLALSRFDRLRNANGSMHTSEIRLAMQKTMQMDAAVFRTSKSLA 482

Query: 459 TALEKINEIAGK----KVLINGVV---DFSKKLELENMVLVSKIVINSALLRKESRGAHF 511
               K++++A      K+     V   D  + LELEN++  +   I SA  R ESRGAH 
Sbjct: 483 EGCAKMDQVASTLPQLKINDRSTVWNSDLVEALELENLMDCALATIVSAEARHESRGAHA 542

Query: 512 RNDYPKTNE 520
             DYP  ++
Sbjct: 543 HEDYPDRDD 551