Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 594 a.a., fumarate reductase (quinol) flavoprotein subunit from Erwinia tracheiphila SCR3

 Score =  307 bits (787), Expect = 6e-88
 Identities = 198/549 (36%), Positives = 297/549 (54%), Gaps = 38/549 (6%)

Query: 4   DVLIIGGGGAAARAAIECGQK----NVVIASKGLFGKSGCTVMAEGGYNAVLNEKDSFEK 59
           D++I+G GGA  RA+I   +     ++ + SK ++     TV AEGG  AV  E DSF+ 
Sbjct: 7   DLVIVGAGGAGLRASIAAAEAYPTLSIALVSK-VYPMRSHTVAAEGGSAAVTQEHDSFDL 65

Query: 60  HYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFNRT 119
           H+ DT+ GG ++ ++ +VD  V + P E   LE +GC + R +      R FGG    RT
Sbjct: 66  HFQDTVSGGDWLCEQDVVDYFVAHCPQEMAQLEIWGCPWSRRQDGSVNVRRFGGMKIERT 125

Query: 120 CYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFGAVFLDLL 179
            ++ D+TG  M+  L +   K+ +I   ++   + L+VDE    G         V ++++
Sbjct: 126 WFAADKTGFHMLHTLFQTSLKYPQITRFDEHFVLDLLVDEGAARG--------LVAMNMM 177

Query: 180 NGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMVQFHPTGM 239
            G +  ++A + +LATGGAG++Y   +N     GDG  +A R GV L DME VQ+HPTG+
Sbjct: 178 EGTLVQIHAGAVVLATGGAGRVYRYNTNGGIVTGDGMGMALRHGVALRDMEFVQYHPTGL 237

Query: 240 LGTGILVTEAVRGEGGILYNKNKERFMKNY-----------DSKRMELSTRDVVAKAIYN 288
            G+GIL+TE  RGEGGI+ NK+  R++++Y            +K MEL  RD V++A ++
Sbjct: 238 PGSGILMTEGCRGEGGIMVNKDGYRYLQDYGLGPETPLGQPKNKYMELGPRDKVSQAFWH 297

Query: 289 EIQEGRGIDGG----VYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHH 343
           E Q+ R I       VYLD+ HL  + + E+L  +    K  VGVD    P+ + PTAH+
Sbjct: 298 ESQKRRTIQTPRGEVVYLDLRHLGEKKLMERLPFICELSKAYVGVDPVTHPIPIRPTAHY 357

Query: 344 FMGGIKINEDCETNISGLFACGEVAG-GLHGANRLGGNALAETQVFGSIAGRNALNYA-E 401
            MGGI+ N  CET I GLFA GE +  GLHGANRLG N+LAE  VFG +AG  A   A E
Sbjct: 358 TMGGIETNAHCETRIQGLFAVGECSSIGLHGANRLGSNSLAELVVFGRLAGEMAAERALE 417

Query: 402 EKIDISKVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRDENGLKTAL 461
            +   + V ++  +  E+            N  +L DE+  TM +   I R    ++  +
Sbjct: 418 SRKSATAVLEAQARDCEQRLQGLIQQQGNENWSTLRDEMGQTMEEGCGIYRTPALMEKTI 477

Query: 462 EKINEIAGK--KVLINGV-----VDFSKKLELENMVLVSKIVINSALLRKESRGAHFRND 514
            K+ E+  +  +V I+             +EL + + V++ + +SA  RKESRGAH R D
Sbjct: 478 NKLAELKERFSRVRISDTSSVFNTQLLYSIELGHGLDVAECMAHSAFQRKESRGAHQRLD 537

Query: 515 YPKTNEECT 523
              T  + T
Sbjct: 538 EGCTQRDDT 546