Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 596 a.a., succinate dehydrogenase subunit A (EC 1.3.5.1) from Enterobacter asburiae PDN3

 Score =  315 bits (807), Expect = 3e-90
 Identities = 205/563 (36%), Positives = 304/563 (53%), Gaps = 48/563 (8%)

Query: 4   DVLIIGGGGAAARAAIECGQKN----VVIASKGLFGKSGCTVMAEGGYNAVLNEKDSFEK 59
           D+ +IG GGA  RAAI   Q N    + + SK ++     TV AEGG  AV  + DSFE 
Sbjct: 7   DLAVIGAGGAGLRAAIAAAQANPNAKIALISK-VYPMRSHTVAAEGGSAAVAQDHDSFEY 65

Query: 60  HYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFNRT 119
           H+ DT+ GG ++ ++ +VD  V + P E   LE++GC + R        R FGG    RT
Sbjct: 66  HFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLEQWGCPWSRRPDGSVNVRRFGGMKIERT 125

Query: 120 CYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFGAVFLDLL 179
            ++ D+TG  M+  L +   +F +I+  ++   + ++VD+ +  G         V ++++
Sbjct: 126 WFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGQARG--------LVAMNMM 177

Query: 180 NGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMVQFHPTGM 239
            G +  + A + ++ATGGAG++Y   +N     GDG  +A   GV L DME VQ+HPTG+
Sbjct: 178 EGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALGHGVPLRDMEFVQYHPTGL 237

Query: 240 LGTGILVTEAVRGEGGILYNKNKERFMKNY-----------DSKRMELSTRDVVAKAIYN 288
            G+GIL+TE  RGEGGIL NKN  R++++Y            +K MEL  RD V++A ++
Sbjct: 238 PGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWH 297

Query: 289 EIQEGRGID----GGVYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHH 343
           E ++G  I       VYLD+ HL  + + E+L  +    K  VGVD  KEP+ V PTAH+
Sbjct: 298 EWRKGNTISTPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKEPIPVRPTAHY 357

Query: 344 FMGGIKINEDCETNISGLFACGEVAG-GLHGANRLGGNALAETQVFGSIAGRNALNYAEE 402
            MGGI+ ++ CET I GLFA GE +  GLHGANRLG N+LAE  VFG +AG  A+  A  
Sbjct: 358 TMGGIETDQQCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRMAGERAMERAAT 417

Query: 403 KIDIS-KVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRDENGLKTAL 461
             + +    D+    +EK            N   + DE+  +M +   I R    ++  +
Sbjct: 418 SGEANGAALDAQVADVEKRLKDLVNQEGNENWSKIRDEMGLSMEEGCGIYRTPELMQKTV 477

Query: 462 EKINEIAG--KKVLINGV-----VDFSKKLELENMVLVSKIVINSALLRKESRGAHFRND 514
           +K+ E+    K+V I         D    +EL + + V++ + +SAL RKESRGAH R D
Sbjct: 478 DKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSALARKESRGAHQRLD 537

Query: 515 YPKTNEECTGNFVAVDGKINFVK 537
                E CT         +NF+K
Sbjct: 538 -----EGCTER-----DDVNFLK 550