Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 588 a.a., succinate dehydrogenase subunit A (EC 1.3.5.1) from Enterobacter asburiae PDN3

 Score =  293 bits (751), Expect = 9e-84
 Identities = 203/554 (36%), Positives = 292/554 (52%), Gaps = 47/554 (8%)

Query: 4   DVLIIGGGGAAARAAIECGQKNVVIASKG-LFGKSGCTVMAEGGYNAVL--NEKDSFEKH 60
           D ++IG GGA  RAA++  Q     A    +F     TV A+GG    L  + +D++E H
Sbjct: 9   DAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNSHEDNWEWH 68

Query: 61  YSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN--- 117
             DT+KG  YI D+  ++ + K  P     L+  G  F R E+    QRPFGGQS N   
Sbjct: 69  MYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRPFGGQSKNFGG 128

Query: 118 ----RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFGA 173
               RT  + DRTGH ++  L +  N      I  +  A+ L+ +    +G  +    G 
Sbjct: 129 EQAARTAAAADRTGHALLHTLYQQ-NLKNHTTIFSEWYALDLVKNA---DGAVV----GC 180

Query: 174 VFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMVQ 233
             L +  G++    A++T+LATGGAG+IY  T+N     GDG  +A R GV + DMEM Q
Sbjct: 181 TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ 240

Query: 234 FHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNEIQEG 293
           FHPTG+ G G+LVTE  RGEGG L NK+ ERFM+ Y     +L+ RDVVA++I  EI+EG
Sbjct: 241 FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG 300

Query: 294 RGIDG----GVYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHHFMGGI 348
           RG DG       L + HL  EV++ +L  +    +    VD  KEP+ V PT H+ MGGI
Sbjct: 301 RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI 360

Query: 349 ---------KINEDCE-TNISGLFACGEVA-GGLHGANRLGGNALAETQVFGSIAGRNAL 397
                     +NE  E   I GLFA GE+A   +HGANRLGGN+L +  VFG   G +  
Sbjct: 361 PTKVTGQALTVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGLHLQ 420

Query: 398 -NYAEEKIDISKVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRDENG 456
            + AE+        D ++  +E+L N + G+ +G +   +   L+  M    S+ R+ + 
Sbjct: 421 ESIAEQGALRDATDDEIDASLERL-NRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDA 479

Query: 457 LKTALEKINEIAGKKVLINGVVDFSKK---------LELENMVLVSKIVINSALLRKESR 507
           +   LE++  I  ++ L N  +D +           LEL+N++  +     SA  R ESR
Sbjct: 480 MAKGLEQLKAI--RERLKNARLDDTSSEFNTQRVECLELDNLMETAFATAMSANFRTESR 537

Query: 508 GAHFRNDYPKTNEE 521
           GAH R D+P  ++E
Sbjct: 538 GAHSRFDFPDRDDE 551