Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 602 a.a., fumarate reductase (quinol) flavoprotein subunit from Escherichia coli ECRC62

 Score =  313 bits (801), Expect = 2e-89
 Identities = 207/567 (36%), Positives = 305/567 (53%), Gaps = 56/567 (9%)

Query: 4   DVLIIGGGGAAARAAIECGQKN----VVIASKGLFGKSGCTVMAEGGYNAVLNEKDSFEK 59
           D+ I+G GGA  RAAI   Q N    + + SK ++     TV AEGG  AV  + DSFE 
Sbjct: 7   DLAIVGAGGAGLRAAIAAAQANPNAKIALISK-VYPMRSHTVAAEGGSAAVAQDHDSFEY 65

Query: 60  HYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFNRT 119
           H+ DT+ GG ++ ++ +VD  V + P E   LE +GC + R        R FGG    RT
Sbjct: 66  HFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERT 125

Query: 120 CYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFGAVFLDLL 179
            ++ D+TG  M+  L +   +F +I+  ++   + ++VD+    G         V ++++
Sbjct: 126 WFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRG--------LVAMNMM 177

Query: 180 NGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMVQFHPTGM 239
            G +  + A + ++ATGGAG++Y   +N     GDG  +A   GV L DME VQ+HPTG+
Sbjct: 178 EGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGL 237

Query: 240 LGTGILVTEAVRGEGGILYNKNKERFMKNY-----------DSKRMELSTRDVVAKAIYN 288
            G+GIL+TE  RGEGGIL NKN  R++++Y            +K MEL  RD V++A ++
Sbjct: 238 PGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWH 297

Query: 289 EIQEGRGID----GGVYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHH 343
           E ++G  I       VYLD+ HL  + + E+L  +    K  VGVD  KEP+ V PTAH+
Sbjct: 298 EWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHY 357

Query: 344 FMGGIKINEDCETNISGLFACGEVAG-GLHGANRLGGNALAETQVFGSIAGRNALNYAE- 401
            MGGI+ +++CET I GLFA GE +  GLHGANRLG N+LAE  VFG +AG  A   A  
Sbjct: 358 TMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAAT 417

Query: 402 ----EKIDISKVYDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRDENGL 457
                +  I      VE+ ++ L N     + G N   + DE+   M +   I R    +
Sbjct: 418 AGNGNEAAIEAQAAGVEQRLKDLVN----QDGGENWAKIRDEMGLAMEEGCGIYRTPELM 473

Query: 458 KTALEKINEIAG--KKVLINGV-----VDFSKKLELENMVLVSKIVINSALLRKESRGAH 510
           +  ++K+ E+    K+V I         D    +EL + + V++ + +SA+ RKESRGAH
Sbjct: 474 QKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAH 533

Query: 511 FRNDYPKTNEECTGNFVAVDGKINFVK 537
            R D     E CT         +NF+K
Sbjct: 534 QRLD-----EGCTER-----DDVNFLK 550