Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 590 a.a., Succinate dehydrogenase flavoprotein subunit from Alteromonas macleodii MIT1002

 Score =  295 bits (754), Expect = 4e-84
 Identities = 198/559 (35%), Positives = 303/559 (54%), Gaps = 55/559 (9%)

Query: 4   DVLIIGGGGAAARAAIECGQ--KNVVIASKGLFGKSGCTVMAEGGYNAVL--NEKDSFEK 59
           D ++IG GGA  RAA++  Q  K+  + SK +F     TV A+GG    L  + +D++E 
Sbjct: 9   DAVVIGAGGAGMRAALQISQSGKSCALLSK-VFPTRSHTVSAQGGITVALGNSHEDNWEW 67

Query: 60  HYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN-- 117
           H  DT+KG  YI D+  ++ + K  P     +E  G  F R E+ +  QRPFGGQS N  
Sbjct: 68  HMYDTVKGSDYIGDQDAIEYMCKTGPEAIIEMENMGLPFSRFENGKIYQRPFGGQSKNFG 127

Query: 118 -----RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFG 172
                RT  + DRTGH ++  L+   N   + K+  +  A+ L+ ++  +         G
Sbjct: 128 GEQGARTAAAADRTGHALLH-LLYQQNVKNKTKVFSEWYALDLVKNQDGD-------VVG 179

Query: 173 AVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMV 232
              +D+ +G++    +++ +LATGGAG+IY  T+N     GDG  +A R GV + DMEM 
Sbjct: 180 CTAIDIESGEVVYFKSRAVVLATGGAGRIYASTTNAHINTGDGVGMALRAGVAVQDMEMW 239

Query: 233 QFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNEIQE 292
           QFHPTG+ G G LVTE  RGEGG L NK+ ERFM+ Y     +L+ RDVVA+++  EI+E
Sbjct: 240 QFHPTGIAGAGTLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMTEIRE 299

Query: 293 GRGIDG----GVYLDVTHLEPEVIKEKLETMFSQFK-LVGVDIRKEPMKVAPTAHHFMGG 347
           GRG +G     + L + HL  +V++ +L  +    +    VD  KEP+ V PT H+ MGG
Sbjct: 300 GRGCEGPWGTHIKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGG 359

Query: 348 IKINED--CET--------NISGLFACGEVA-GGLHGANRLGGNALAETQVFGSIAGRNA 396
           I  N D  C T         ++GLFACGE+A   +HGANRLGGN+L +  VFG   G   
Sbjct: 360 IPTNVDGQCLTVDENGNDKVVNGLFACGEIACVSVHGANRLGGNSLLDLVVFGRATG--- 416

Query: 397 LNYAEEKIDISKVYDSVEKYIE-------KLKNTFKGSNSGNNVYSLIDELKNTMWDFVS 449
           L+  +   +++   D+ E  +E       + +N+ KG   G +   +  +L+  M    S
Sbjct: 417 LHLGKTLSEMAPTRDASESDLEASMTRFNRWENSEKG--KGEDPVQIKKDLQKCMQLNFS 474

Query: 450 ISRDENGLKTALEKINEIAGK---KVLINGVVDFSKK----LELENMVLVSKIVINSALL 502
           + R+   +   L++++EI  +     L +   DF+ +    LEL+N++  +     +A  
Sbjct: 475 VFREGEAMAEGLKELSEIRERLKHARLDDKSADFNTQRIECLELDNLMETAYSTAVAANF 534

Query: 503 RKESRGAHFRNDYPKTNEE 521
           R ESRGAH R D+P  +++
Sbjct: 535 RTESRGAHSRFDFPDRDDD 553