Pairwise Alignments

Query, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

Subject, 613 a.a., succinate dehydrogenase flavoprotein subunit from Agrobacterium fabrum C58

 Score =  264 bits (675), Expect = 6e-75
 Identities = 180/546 (32%), Positives = 276/546 (50%), Gaps = 43/546 (7%)

Query: 4   DVLIIGGGGAAARAAIECGQKNVVIAS-KGLFGKSGCTVMAEGGYNAVLNEK--DSFEKH 60
           DV+++G GGA  RA +   ++    A    +F     TV A+GG  A L     D ++ H
Sbjct: 22  DVIVVGAGGAGLRATLGMAEQGFRTACITKVFPTRSHTVAAQGGIAASLTNMTPDCWQWH 81

Query: 61  YSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN--- 117
             DT+KG  ++ D   +  L   AP     LE +G  F R+   +  QRPFGG   N   
Sbjct: 82  LYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYGVPFSRNAEGKIYQRPFGGHMQNYGE 141

Query: 118 -----RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFG 172
                RTC + DRTGH ++  L     +    +   +  A+ LI+     +G+    C G
Sbjct: 142 GPPVQRTCAAADRTGHAILHTLYGQSLR-NNAEFFIEYFALDLIM---APDGR----CTG 193

Query: 173 AVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMV 232
            V  +L +G I+   AK  +LATGG G+ Y   ++     GDG  +  R G+ L DME V
Sbjct: 194 VVAWNLDDGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGDGGGMIARAGLPLQDMEFV 253

Query: 233 QFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNEIQE 292
           QFHPTG+ G G L+TE  RGEGG L N   ERFM+ Y     +L++RDVV++ +  EI+E
Sbjct: 254 QFHPTGIYGAGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASRDVVSRCMTMEIRE 313

Query: 293 GRGIDGG---VYLDVTHLEPEVIKEKLETMFSQFKL-VGVDIRKEPMKVAPTAHHFMGGI 348
           GRG+      ++L + HL+P ++ E+L  +    K+  GVD+ +EP+ V PT H+ MGGI
Sbjct: 314 GRGVGKNKDHIFLHLDHLDPAILHERLPGISESAKIFAGVDVTREPIPVLPTVHYNMGGI 373

Query: 349 KIN----------EDCETNISGLFACGEV-AGGLHGANRLGGNALAETQVFGSIAGRNAL 397
             N           + E    GL A GE     +HGANRLG N+L +  VFG  A   A 
Sbjct: 374 PTNYWGEVLNADANNPERIAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAIRAA 433

Query: 398 NYAEEKIDISKV-YDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRDENG 456
              +    +  +   + +K +E+  ++ + +N       L D+++  M D  ++ R +  
Sbjct: 434 QVIDRDAPVPALDIAACDKIMERF-DSLRYANGSTPTAVLRDKMQRAMQDDAAVFRTQES 492

Query: 457 LKTALEKIN----EIAGKKVLINGVV---DFSKKLELENMVLVSKIVINSALLRKESRGA 509
           L++  ++++    E+   KV    +V   D  + LEL N++  +   +  A  RKESRG+
Sbjct: 493 LESGCQRLSAIWKELPDVKVTDRSMVWNSDLVETLELHNLMANAITTVYGAEARKESRGS 552

Query: 510 HFRNDY 515
           H R D+
Sbjct: 553 HAREDF 558