Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 510 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

 Score =  196 bits (498), Expect = 2e-54
 Identities = 156/531 (29%), Positives = 245/531 (46%), Gaps = 40/531 (7%)

Query: 29  PENFNFAYDIVDEYAKIAPEKIAIIWCDDNNDEKI--FTFKDMKKYSDKAANFFLKHGIK 86
           P  FN A   V   A  A +K A++  +      I  +++ ++++   + A  F  +G+ 
Sbjct: 10  PHPFNLARFCVTG-AGAAADKPALLVAEGPKGRIIERWSYGELREAVLRVAGGFAGYGLP 68

Query: 87  KGDTVMLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTTKDIVYRIEKAGLKMIVCIGENG 146
           +G  V+L + +  +F     G    G   IP + MLT  ++   ++ +G  ++V  G   
Sbjct: 69  RGSRVLLRVGNTSQFPLMFFGAIAAGLAPIPTSTMLTAHEVEMILDDSGAALVVGDGSGV 128

Query: 147 VPDYVDEAVSEINSDVLKACVSNLNNDSWIDFSKELEESSEDFTRPVGEMDTKNDDVLVA 206
           +P      V  I++    A +  L   S IDF+                 DT  DD+   
Sbjct: 129 IPA-PRAGVGVIDA----AGMDRLGAASAIDFA-----------------DTGADDLAFL 166

Query: 207 YFSSGTTGYPKLIQHDHEYPLGHITTAKYWQNVEDDGLHYTVADSGWAKCIRGKLYGQWI 266
            F+SGT+G PK + H     LG I     W +++ D L +      W   +   L   W 
Sbjct: 167 VFTSGTSGRPKGVAHAQRVGLGRIPMRAGWHDLKGDDLLFHAGAFNWTYTLGVGLMDPWA 226

Query: 267 AGTAVFVYDYDRFDAGNMLEKIAKYKITTFCAPPTIYRFMIKQ-DISKADFSSLHYAVTA 325
            G    V+  DR   G   + + +   T F A P +YR ++K  DI+ A F +L + +TA
Sbjct: 227 VGATSIVHLGDR-PPGAWPDLLEETGATQFAAVPGLYRRILKYADITPARFPALRHGLTA 285

Query: 326 GEPLNPEVYNKFLEFTGLRLMEGFGQTETVVSVANFTWMDPKPGSMGKPVPIFDLMIKGP 385
           GE L   ++ +++  TG  L E  G +E    V++   +  +PGS GKP     +++  P
Sbjct: 286 GEALKAALHGEWVAATGRPLYEALGMSEISTYVSSGPAVPTRPGSPGKPQAGRRVVVLPP 345

Query: 386 DGKECDV------GEEGELAFKTEDGKPLGLFSGYFKDPERTKKAWYDGYYHTGDTAWKD 439
           +G+  D       G+ G LA    D    GL  GY+  P+ T  A    ++ TGD A  D
Sbjct: 346 EGEAPDAQRPMPAGDTGVLAVHRSDP---GLMLGYWGLPDETAAAMRGEWFLTGDLARFD 402

Query: 440 EDGYLWFVGRNDDLIKSSGYRIGPFEVESALISHPAVLECAITGVPDPVRGQIVKATIVL 499
            DGYLW+ GR DD + + GYR+ P EVE  L +HP V E A+          +V A +VL
Sbjct: 403 ADGYLWYEGRADDQMNAFGYRVAPEEVERVLAAHPDVAEVAVAEAQSG-DVSLVTAFVVL 461

Query: 500 TSEYEASEELKKELQDHVKHNTAPYKYPRAIEFVKELPKTISGKIRRVEIR 550
            +  EA       L+     + A YK PR+  F++ELP+T SGK+ R  +R
Sbjct: 462 QAGAEAD---AAALEAFAAEHLAEYKRPRSYVFIEELPRTGSGKVMRRALR 509