Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 540 a.a., Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases from Variovorax sp. SCN45

 Score =  192 bits (488), Expect = 3e-53
 Identities = 146/470 (31%), Positives = 223/470 (47%), Gaps = 20/470 (4%)

Query: 84  GIKKGDTVMLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTTKDIVYRIEKAGLKMIVCIG 143
           G+  G+ V+L   +        L + K G +A+    +L +K++   IEKA     +C G
Sbjct: 84  GLVPGNRVLLRGGNSVAMALAWLAVVKAGLIAVATMPLLRSKELGEIIEKAQPVAALCDG 143

Query: 144 ENGVPDYVDE-AVSEINSDVLKACVSNLNNDSWIDFSKELEESSEDFTRPVGEMDTKNDD 202
                  +DE A ++    VL   ++    D+    S    + S  FT       T  DD
Sbjct: 144 R-----LLDELATAQREHPVLATVIAFNQPDAPDSLSSRAAKKSGVFTA----CPTAADD 194

Query: 203 VLVAYFSSGTTGYPKLIQHDHEYPLGHITT-AKYWQNVEDDGLHYTVADSGWAKCIRGKL 261
           + +  F+SGTTG PK     H   L    T  ++      D +        +   + G L
Sbjct: 195 IALLAFTSGTTGKPKAPVTTHRDVLAMCETWPRHVLKARSDDIVVGSPPLAFTFGLGGLL 254

Query: 262 YGQWIAGTAVFVYDYDRFDAGNMLEKIAKYKITTFCAPPTIYRFMIKQDISKADFSSLHY 321
                AG +++  D   F    +++ I +   T     PT YR M    + +    SL  
Sbjct: 255 VFPMWAGASMYFPDAP-FSPEGLVKLINQVGATISYTAPTFYRQMAPF-VKQHGMPSLRI 312

Query: 322 AVTAGEPLNPEVYNKFLEFTGLRLMEGFGQTETVVSVANFTWMDPKPGSMGKPVPIFDLM 381
           +V+AGE L       + E TG+ +++G G TE      +    + + G++GK VP F   
Sbjct: 313 SVSAGEALPDATRQLWKEATGIEMLDGIGGTEVFHIYISAAGNEVRRGAVGKAVPGFTAK 372

Query: 382 IKGPDGKECDVGEEGELAFKTEDGKPLGLFSGYFKDPERTKKAWYDGYYHTGDTAWKDED 441
           +   +G E   G  G+LA +     P+G    Y  DP +      +G+ + GD+  +D+D
Sbjct: 373 VVDNEGNEVPHGTVGKLALQG----PVGC--RYLDDPRQADYV-KNGWNYPGDSFVQDDD 425

Query: 442 GYLWFVGRNDDLIKSSGYRIGPFEVESALISHPAVLECAITGVPDPVRGQIVKATIVLTS 501
           GY ++  R DD+I ++GY +G  EVE AL+ HPAV EC + G PD  RG IVKA  VL  
Sbjct: 426 GYFFYQARADDMIITAGYNVGGPEVEDALLKHPAVAECGVIGKPDADRGMIVKAFCVLKP 485

Query: 502 EYEASEELKKELQDHVKHNTAPYKYPRAIEFVKELPKTISGKIRRVEIRE 551
             E    + K LQDHVK   AP+KYPR IEFV  LP+T +GK++R ++R+
Sbjct: 486 GQEGDAAMVKTLQDHVKATIAPFKYPREIEFVTALPRTETGKLQRFKLRQ 535