Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 515 a.a., Benzoate--CoA ligase (EC 6.2.1.25) from Variovorax sp. SCN45

 Score =  182 bits (461), Expect = 4e-50
 Identities = 149/542 (27%), Positives = 252/542 (46%), Gaps = 46/542 (8%)

Query: 29  PENFNFAYDIVDEYAKIAPEKIAIIWCDDNNDEKIFTFKDMKKYSDKAANFFLKHGIKKG 88
           P  FNFA  +   +A          + DD       ++  +++ + + A      GI++ 
Sbjct: 4   PARFNFAEHL---FALNRGRAARTAYIDDRGT---LSYGQLEERARRLAAALKAAGIRRE 57

Query: 89  DTVMLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTTKDIVYRIEKAGLKMIVCIGENGVP 148
           + V+L +    ++    LG    G V +    +LT  D  Y ++ +  + ++  G   + 
Sbjct: 58  ERVLLLMLDGNDWPVSFLGCLYAGIVPVAVNTLLTPDDYAYMLDHSRAQAVLVSG--ALL 115

Query: 149 DYVDEAVSEINSDVLKACVSNLNN---DSWIDFSKELEESSEDFTRPVGEMDTKNDDVLV 205
             + EA++    +V    VS       D   +F   +  ++E    PV   +T +DD   
Sbjct: 116 PTLQEAMARGGHEVQAMFVSQPAGPLPDGAREFDAAIA-AAEPLASPV---NTTSDDPGF 171

Query: 206 AYFSSGTTGYPKLIQHDHEYPLGHITTAKYWQNVE----------DDGLHYTVADSGWAK 255
             +SSG+TG PK   H H         A  W   E          +D + ++ A   +A 
Sbjct: 172 WLYSSGSTGKPKGTVHTH---------ANLWWTAELYGKPVLALTEDDVCFSAAKMYFAY 222

Query: 256 CIRGKL-YGQWIAGTAVFVYDYDRFDAGNMLEKIAKYKITTFCAPPTIYRFMIKQD-ISK 313
            +   L +   +  T V + +    DA     +  ++K T F   PT +  M+    +  
Sbjct: 223 GLGNALTFPLSVGATVVLMAERPTPDA--TFRRWMEHKPTVFFGAPTGFAGMLASPKLPA 280

Query: 314 ADFSSLHYAVTAGEPLNPEVYNKFLEFTGLRLMEGFGQTETVVSVANFTWMDPKPGSMGK 373
            +  +L    +AGE L  E+  +F    G  +++G G TE +    +    D + G+ GK
Sbjct: 281 REAVALRMCSSAGEALPGEIAQRFKAQFGCEIIDGIGSTEMLHIFISNRPGDIRYGTTGK 340

Query: 374 PVPIFDLMIKGPDGKECDVGEEGELAFKTEDGKPLGLFSGYFKDPERTKKAWYDGYYHTG 433
           PV  +++ ++G DG+    GE G+L  +      +     Y+ + E++++ +  G+  +G
Sbjct: 341 PVDGYEVELRGEDGRPVPDGEVGDLYIRGPSSALM-----YWTNREKSRETFQGGWTKSG 395

Query: 434 DTAWKDEDGYLWFVGRNDDLIKSSGYRIGPFEVESALISHPAVLECAITGVPDPVRGQIV 493
           D   +D DGY  + GR+DD++K SG  + PFEVE+ L+ HP+VLE A+ G  D       
Sbjct: 396 DKYTRDADGYFTYAGRSDDMLKVSGIYVSPFEVEATLMQHPSVLEAAVIGKEDTEGLTKT 455

Query: 494 KATIVLTSEYEASEELKKELQDHVKHNTAPYKYPRAIEFVKELPKTISGKIRRVEIRETD 553
           KA +VL     ASEE   EL+  VK   APYKYPR +EFV ELPKT +GKI+R  +RE +
Sbjct: 456 KAFVVLKDGAAASEE---ELKAFVKERLAPYKYPRFLEFVSELPKTATGKIQRFRLREKE 512

Query: 554 EK 555
           ++
Sbjct: 513 KQ 514