Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 526 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

 Score =  181 bits (460), Expect = 5e-50
 Identities = 141/511 (27%), Positives = 232/511 (45%), Gaps = 67/511 (13%)

Query: 56  DDNNDEKIFTFKDMKKYSDKAANFFLKHGIKKGDTVMLTLKSRYEFWFCMLGLHKIGAVA 115
           DD   ++I +F  +   + + A++    GI+ G+ +   L+    F+ C+ G  + GA++
Sbjct: 61  DDGGRDEILSFDAIAAGAARFAHWLDAEGIQPGERIAFMLEPSLPFYVCLFGAMQTGAIS 120

Query: 116 IPATHMLTTKDIVYRIEKAGLKMIVCIGENG-VPDYVDEAVSEINSDVLKACVSNLNNDS 174
           +P   +     +  R++     +++   E   +   +D     +  D L A ++      
Sbjct: 121 VPLFTLFGPDALRLRVDDCKPTILITNAEKAELARSMDGPRVIVADDALLADLARFP--- 177

Query: 175 WIDFSKELEESSEDFTRPVGEMDTKNDDVLVAYFSSGTTG-YPKLIQHDHEYPLGHITTA 233
              +S +                TK +D+ V  ++SGTT   P+ ++H H   +  +  A
Sbjct: 178 -ASYSPK----------------TKANDLAVFQYTSGTTRELPEAVKHSHRALVTLMFAA 220

Query: 234 KYWQNVEDDGLHYTVADSGWAKCIRGKLYGQWIA-----GTAVFVYDY-DRFDAGNMLEK 287
            Y   +      +  +   W        +G W       G  V    +  RFD   +++ 
Sbjct: 221 LYGTGIRPGDEFFCPSSPAWG-------HGLWHGTLAPLGLGVTTGTFAGRFDPVRLMQA 273

Query: 288 IAKYKITTFCAPPTIYRFMIKQDISKADFSSLHYAVTA--GEPLNPEVYNKFLEFTGLRL 345
           ++ +KIT   A  T YR M+K     ADF+  H+   +  GEP++P           +  
Sbjct: 274 LSDHKITNMSAAATHYR-MMKNSGRAADFA-FHFDKLSYTGEPIDPATLEFIDAHFKVSA 331

Query: 346 MEGFGQTETVVSVANFTWMDP---KPGSMGKPVPIFDLMIKGPDGKECDVGEEGELAFKT 402
              +G TE  V + N+        KPGS+GK VP   L ++ PDG  CD GE GEL    
Sbjct: 332 CSMYGTTEIGVVLVNYPGAQDFRVKPGSLGKAVPGQRLEVQRPDGSACDPGEIGELMLWR 391

Query: 403 EDGKPLGLFSGYFKDPERTKKAWYDGYYHTGDTAWKDEDGYLWFVGRNDDLIKSSGYRIG 462
            D                        +  T D A  D DGY +  GR DD+I S+G+ + 
Sbjct: 392 RDR-----------------------WETTKDRAKIDADGYFYHCGRADDVIISAGWTMS 428

Query: 463 PFEVESALISHPAVLECAITGVPDPVRGQIVKATIVLTSEYEASEELKKELQDHVKHNTA 522
             E+E+ L+ H AVLECA+ GVPD  RGQ+VKA I+L    + S+ L +ELQD  +   A
Sbjct: 429 AVEIENTLLKHEAVLECAVIGVPDDKRGQVVKAFIILNR--DGSDALVRELQDFTREKLA 486

Query: 523 PYKYPRAIEFVKELPKTISGKIRRVEIRETD 553
            +++PR +EFV +LPKT +GK+ R  +R+ +
Sbjct: 487 QHEFPRIVEFVTDLPKTPAGKVHRKILRDRE 517