Pairwise Alignments

Query, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

Subject, 653 a.a., acetate--CoA ligase from Dickeya dadantii 3937

 Score =  179 bits (454), Expect = 3e-49
 Identities = 165/579 (28%), Positives = 261/579 (45%), Gaps = 52/579 (8%)

Query: 9   VKKTEFESYEDFVENFKIDVPENFNFAYDIVDEYAKIAPEKIAIIW-CDDNNDEKIFTFK 67
           VK T F+     +  F+       N A + +D +     ++ AIIW  DD  + K  T++
Sbjct: 55  VKNTSFDPGHVRIRWFE---DGTLNVAANCLDRHLDTMGDQTAIIWEGDDAGESKKVTYR 111

Query: 68  DMKKYSDKAANFFLKHGIKKGDTVMLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTTKDI 127
           ++ +   + AN     GI+KGD V + +    E    ML   ++GAV        + + I
Sbjct: 112 ELHQAVCRFANVLKSKGIRKGDVVAIYMPMVPEAAVAMLACARVGAVHSVIFGGFSPESI 171

Query: 128 VYRIEKAGLKMIVCIGEN-----GVP--DYVDEA-----VSEINSDVLKACVSNLNNDSW 175
             RI  +  K++V   E       +P    +DEA     V+ +N  ++        N  W
Sbjct: 172 AGRIVDSSAKLVVTADEGIRAGRAIPLKKNIDEALRNPAVTSVNHVIVFQRTGKPGN--W 229

Query: 176 ID----FSKELEESSEDFTRPVGEMDTKNDDVLVAYFSSGTTGYPKLIQHDHE-YPLGHI 230
            D    +  EL    +D   P  EM+   +D L   ++SG+TG PK + H    Y +   
Sbjct: 230 QDGRDLWWHELIAQVDDHCPPE-EMNA--EDPLFILYTSGSTGKPKGVLHTTGGYLVYAA 286

Query: 231 TTAKYWQNVEDDGLHYTVADSGWAKCIRGKLYGQWIAGTAVFVYDY--DRFDAGNMLEKI 288
            T KY  +     +++  AD GW       LYG    G    +++   +   A  M + +
Sbjct: 287 ATFKYVFDYHPGDVYWCTADVGWVTGHSYLLYGPLACGAITLMFEGVPNWPTASRMGQVV 346

Query: 289 AKYKITTFCAPPTIYRFMIKQD---ISKADFSSLHYAVTAGEPLNPEVYNKFLEFTG--- 342
            K+++      PT  R ++      I      SL    + GEP+NPE +  + +  G   
Sbjct: 347 DKHQVNILYTAPTAIRALMADGDKAIEGTSRQSLKIMGSVGEPINPEAWEWYFKKIGNSR 406

Query: 343 LRLMEGFGQTETVVSVANFTWMDPKPGSM-GKP----VPIFDLMIKGPD--GKECDVGEE 395
             +++ + QTET         + P PG++  KP    +P F +     D  G   D   E
Sbjct: 407 CPIVDTWWQTET-----GGFMITPLPGAIEAKPGSATLPFFGVQPALVDNLGNPQDGACE 461

Query: 396 GELAFKTEDGKPLGLFSGYFKDPERTKKAWYD---GYYHTGDTAWKDEDGYLWFVGRNDD 452
           G L     D  P G     F D ER ++ ++    G Y +GD A +DEDGY W  GR DD
Sbjct: 462 GNLVIT--DSWP-GQARTLFGDHERFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDD 518

Query: 453 LIKSSGYRIGPFEVESALISHPAVLECAITGVPDPVRGQIVKATIVLTSEYEASEELKKE 512
           ++  SG+R+G  E+ESAL+SHP + E A+ G+P  ++GQ + A I L    E + EL  E
Sbjct: 519 VLNVSGHRLGTAEIESALVSHPKIAEAAVVGIPHSLKGQAIYAYITLNHGEEPTSELYTE 578

Query: 513 LQDHVKHNTAPYKYPRAIEFVKELPKTISGKIRRVEIRE 551
           +++ V+    P   P  + +   LPKT SGKI R  +R+
Sbjct: 579 VRNWVRKEIGPIATPDILHWTDALPKTRSGKIMRRILRK 617