Pairwise Alignments

Query, 351 a.a., 3-methyl-2-oxobutanoate dehydrogenase subunit VorB from Methanococcus maripaludis S2

Subject, 405 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 81/310 (26%), Positives = 130/310 (41%), Gaps = 39/310 (12%)

Query: 8   GNTAVIIGAMYAGCDCYFGYPITPASEVLHEASKYFP--MVGRKFVQAESEEAAINMVYG 65
           GN A   GA  +  D    YPITP S ++   +++     +    +  E E   +++++G
Sbjct: 14  GNEAAAWGACLSRPDMVAVYPITPQSSLVEYLAQFIADGRMDADLMDVEGEHTVLSVLHG 73

Query: 66  AASTGKRVLCATSGPGMSLKQEGISFLAGSELPCVLVNVQRAGPGLGNIGPEQADYNQAV 125
           A   G R   ATS  G++   E      G  LP V+  V R       +   Q D     
Sbjct: 74  AVLAGARTYSATSAQGLAFMFEPYFRTPGLRLPMVVSLVTRDAVSPTCVWGGQQDAMTVK 133

Query: 126 KGGGHGNYKNIVLAPNSVQEMCDFTAKAFELSTK--YKNPVIVLSDG-VLGQMVEPLKFP 182
           + G       I +   + QE+ D    A++++       PV V  DG  L   V  ++ P
Sbjct: 134 EVGW------IHMYCETQQEILDTIPIAYKVAEHPDVMLPVNVNHDGNYLSYGVARVELP 187

Query: 183 EQAIKP----EIDESWAVCGTKETRK----------NLVTSIFLDFKQLEEFNYKLQDKY 228
           +Q++      E   +W  C   E              +  S+F+ +++       +QD  
Sbjct: 188 DQSVVDAFLGEKQVNWHACLDPERPMAVDPLTGGAGGIGPSLFVKYRK--GICAGMQDAL 245

Query: 229 EIIKENEQDF------------EGYMLDDAEIILVSYGISSRISKTAVDVARKEGLKVGL 276
            II+E  +D+            E Y ++DAE+ LV+ G  +  +K AVD AR  G K+GL
Sbjct: 246 RIIEEAHEDWGRRTGRYWSPLIEEYRMEDAEVALVTIGSMTGAAKDAVDDARASGKKIGL 305

Query: 277 FRPKTLFPFP 286
            + KT  PFP
Sbjct: 306 VKIKTFRPFP 315