Pairwise Alignments

Query, 497 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 587 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  108 bits (270), Expect = 5e-28
 Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 13/196 (6%)

Query: 293 INYNPIQDIKENYVNIVDISELDESSTDLIISYFTGEILKDRKKV-LWDTKVAK------ 345
           I YNP ++     V ++D+S +      + +S  +  I +      ++ TK  +      
Sbjct: 380 IGYNPEENAN---VTVLDLSGIPFEVLSITVSLISRLIFEHGYHYKVYRTKKGETVNNDA 436

Query: 346 PIFIIYEEAHLIVPQNRPTK---SKIPISKIAREGRKFGVGICLVSQRPKTLDQESLSQC 402
           PI ++YEEAH  VP +   K   +K  I +IA+EGRK+GV + L SQRP  + +   SQC
Sbjct: 437 PILLVYEEAHKYVPTSDLAKYRAAKQSIERIAKEGRKYGVTLLLSSQRPSEISETIFSQC 496

Query: 403 NNFIISKLIEPSDQKHVQHASENLSEDLLNQLPGLNVGEAVIIGPCLKIPAMVKIKRFEG 462
           NNF+  +L  PSDQ +V+    +    L+ ++P L  GEA++IG  L +P++VKI   + 
Sbjct: 497 NNFVAMRLTNPSDQNYVRRLLPDTLGKLIEKMPNLGAGEALLIGDSLVMPSLVKIDVCDP 556

Query: 463 EYGGEDVKFDELWTTE 478
                D+ + ELW  E
Sbjct: 557 APSSADIPYWELWKEE 572



 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 17/98 (17%)

Query: 99  PGTEVYDASEKILGEIFSKGT-----IEIGNLIS-ADSKVKLDVNKLCSRHLAILAITGM 152
           P T V  A+ + + +IF          E  +L++  D +V +D N+  ++H+A++  TG 
Sbjct: 94  PPTGVAPATIQDIKKIFEDSVPTNRKFEFSSLVTDPDIRVPVDGNRFFNKHIAVVGSTGA 153

Query: 153 GKSNTVSVLLE---------ELNNIHATVLVFDMHREY 181
           GKSNTV+ +++           NN HA  ++FD+H EY
Sbjct: 154 GKSNTVTRIIQTSTTKTPSGTQNNSHA--IIFDIHSEY 189



 Score = 28.1 bits (61), Expect = 9e-04
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 406 IISKLIEPSDQKHVQHASENLSEDLLNQLPGLNVGEAVIIGPCLKIPAMVK-IKRFEGEY 464
           I S LIE  D+K+ +H  E L   ++     +  G+A+ I P    PA ++ IK+   + 
Sbjct: 54  IESFLIEVDDRKNRRHVIEALPLGVIKDDKFIRGGDALTIPPTGVAPATIQDIKKIFEDS 113

Query: 465 GGEDVKFD-ELWTTEKEKNIPEFIESNELFN 494
              + KF+     T+ +  +P  ++ N  FN
Sbjct: 114 VPTNRKFEFSSLVTDPDIRVP--VDGNRFFN 142