Pairwise Alignments

Query, 382 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 401 a.a., putative Sulfonate ABC transporter, periplasmic sulfonate-binding protein from Pseudomonas putida KT2440

 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 57/252 (22%), Positives = 96/252 (38%), Gaps = 46/252 (18%)

Query: 33  ADLKVAYLPSDHDAPLFVAAEYPNVFKDEYGVYLQEVENKKTYELYENDKLVANVEFIKV 92
           A +++ YLP     PL VA                         L+E + + A  E   +
Sbjct: 44  APVRIGYLPITDATPLLVA---------------------HNNGLFEAEGIKA--ERPVL 80

Query: 93  IEGGAKIMTLMAQGQVDVGLNGVPPAVFSIDQGTN--AKIVSPAQSEGSAIVIRSDIPAE 150
           +   A+++     GQV+V ++ + P       G+   AK+V+     GS + +  DI A 
Sbjct: 81  LRSWAQVIEAFISGQVNV-IHLLSPMTVWARYGSKVPAKVVAWNHVGGSGLTVAPDISA- 138

Query: 151 TWDEFVVYIKEQADSGVQLKIGHPLPTSIQYVMIKSALDTEGITYTENPNDKDAMVQLIN 210
                   +K+     V +    P   SI  V+++  L+  G+T    P +       +N
Sbjct: 139 --------VKQLGGKTVAI----PFWYSIHNVVLQQLLNDNGLTPVSKPANAQLAANEVN 186

Query: 211 CK--GQGTMPQLLSSNELDAVIAWEPTPEQLAVLGIGKSVIYSGDIPPAGMWVNHPCCVF 268
                   MP  L+S  +   I  EP       L +G+   ++GD+     W NH CCV 
Sbjct: 187 LLVLPPSDMPPALASKRIAGYIVAEPFNALAENLKVGRVQRFTGDV-----WRNHACCVV 241

Query: 269 VASNDAVENKRE 280
                 + N+ E
Sbjct: 242 FMHEHDLNNRPE 253