Pairwise Alignments

Query, 382 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 310 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score = 53.5 bits (127), Expect = 8e-12
 Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 29/196 (14%)

Query: 97  AKIMTLMAQGQVDVGLNGVPPAVFSIDQGTNAKIVSPAQSEGSAIVIRSDIPAETWDEFV 156
           A ++  +A   +D G  G  P  F+  +G  AK +   + EG+AI++++D P +      
Sbjct: 63  APLLEALAAEALDAGSVGDAPLTFAAARGVKAKAIFATKYEGNAIIVKNDAPYQG----- 117

Query: 157 VYIKEQADSGVQLKIGHPLPTSIQYVMIKSALDTEGITYTENPNDKDAMVQLINCKGQGT 216
             IK+     V    G     S  + +I  +L   G+        +DA+  +     + T
Sbjct: 118 --IKDLVRKKVAFVKG-----SAGHALILQSLKEAGL-------KEDAITPVFLPPAEAT 163

Query: 217 MPQLLSSNELDAVIAWEPTPEQLAVLGIGKSVIYSGDIPPAGMWVNHPCCVFVASNDAVE 276
           +   L++  +DAV  WEP     A L  G  +I  G   P+          F+AS  A+E
Sbjct: 164 L--ALTNGSVDAVSLWEPY-ISFATLKSGARIIVDGKNYPS-------LSYFIASEAAIE 213

Query: 277 NKRESVKAFLKLMALA 292
            KR+ +K F+   A A
Sbjct: 214 GKRDILKDFVARSAKA 229