Pairwise Alignments

Query, 442 a.a., FAD-dependent oxidoreductase from Methanococcus maripaludis S2

Subject, 846 a.a., Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) from Pseudomonas simiae WCS417

 Score =  123 bits (308), Expect = 3e-32
 Identities = 93/345 (26%), Positives = 161/345 (46%), Gaps = 34/345 (9%)

Query: 54  DFDTIIMHTPKDYKAKGIDVIVEAEVLDVVSGENKVIYKKDGTETELKYDNLVLATGGTP 113
           D +++ +     Y+  G+ + +   VL++     +VI   DG    + YD LVLATG  P
Sbjct: 58  DAESLALSDASLYQTPGVTLHLGVPVLEIDRARCEVI-TADGC---VAYDKLVLATGSYP 113

Query: 114 FVPPIEGVTLDGVFKVRTIEDGQKITEWAKDTKNVVVAGAGAIGIEIAFGLKEIGLDVTV 173
           FVPPI+G   D     RT+ED   I + A + +  VV G G +G+E A  LK +GL+  V
Sbjct: 114 FVPPIDGAEGDSRLVYRTLEDLDAIRKAAANARRGVVVGGGLLGLEAANALKSLGLEAHV 173

Query: 174 VEMVPQVFPRALDPDMAETVQKYLEEQGIKIILEKPVGKIIGND--KVEAVLVGEETIPA 231
           VE  P++ P  LD      ++  +E  G+ + L +    I   +  +       +E +  
Sbjct: 174 VEFAPRLMPVQLDDFGGLALKAQIERLGVGVHLSRATQSISAGEHYRYRMNFANDEFLET 233

Query: 232 EMVIMSTGVRSNIELAKSAGCDIG-RWAVLTNEKMQTSIPNIYAVGDCVEVIDAITMQNT 290
           ++++ S G+R+   LA+ AG DIG R  V+ N++  +  PNIYA+G+C     ++     
Sbjct: 234 DLIVFSAGIRAQDALARQAGLDIGPRGGVVINDECLSCDPNIYAIGECASWNGSL----- 288

Query: 291 LSPFGTTAVRQGKVAAKAIVKLEAEIKPVLNSMVSKIGKLEIGGTGMTETAAKMNGIEI- 349
              FG  A         A +  +   +P + + +S              T  K+ G+++ 
Sbjct: 289 ---FGLVAPGYQMARGVAALLCKQTAEPFVGADMS--------------TKLKLLGVDVG 331

Query: 350 VLGYSKALTRA----RYYPGGKPIYIKMVADKMTKKVIGCQIISE 390
            +G + A T      ++       Y ++V D   K+VIG  ++ +
Sbjct: 332 SIGDAHAHTPGARSYQFIDEASASYRRLVVDASGKQVIGAVLVGD 376