Pairwise Alignments

Query, 442 a.a., FAD-dependent oxidoreductase from Methanococcus maripaludis S2

Subject, 815 a.a., nitrite reductase large subunit from Agrobacterium fabrum C58

 Score =  154 bits (388), Expect = 1e-41
 Identities = 96/280 (34%), Positives = 153/280 (54%), Gaps = 7/280 (2%)

Query: 3   VVIIGSG-AGGLTTASNIKKHDKNAKVTVITSDKYIAYSPCAIPYVIGEEIADFDTIIMH 61
           +VIIG+G A G    +  +       VT+  ++  + Y    +  V+  E   ++ I++H
Sbjct: 5   LVIIGNGMAPGRMLENLFETAPGLYDVTIFNAEPRVNYDRIMLSPVLSGE-KSYEDIVIH 63

Query: 62  TPKDYKAKGIDVIVEAEVLDVVSGENKVIYKKDGTETELKYDNLVLATGGTPFVPPIEGV 121
             + Y A  + +   A+V  +    NK++  ++G      YD LV+ATG  PF+ P+ G 
Sbjct: 64  NDEWYAANNVTLHKGAKVTRI-DRANKIVTSENGITAS--YDRLVIATGSLPFIIPVPGH 120

Query: 122 TLDGVFKVRTIEDGQKITEWAKDTKNVVVAGAGAIGIEIAFGLKEIGLDVTVVEMVPQVF 181
            L GV   R ++D  K+ E AK     +V GAG +G+E A+GLK  G+DVTV+ ++P + 
Sbjct: 121 QLPGVLAYRDLDDVTKMLEIAKGKGRAIVIGAGLLGLEAAYGLKRQGMDVTVIHLMPTIM 180

Query: 182 PRALDPDMAETVQKYLEEQGIKIILEKPVGKIIGNDKVEAV-LVGEETIPAEMVIMSTGV 240
            R LDP  A  ++K L E+GI II +     I+G +KVE + L     I  +MV+M+ G+
Sbjct: 181 ERQLDPAAAYLLEKALNERGIDIITKANTKCILGEEKVEGIELEDGRIIKGDMVVMAVGI 240

Query: 241 RSNIELAKSAGCDIGRWAVLTNEKMQTSIPNIYAVGDCVE 280
           R    LAK AG  + R  ++ ++ M TS  +IYA+G+C E
Sbjct: 241 RPASGLAKEAGIAVNR-GIVVDDGMMTSDASIYALGECAE 279