Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 375 a.a., Putative transmembrane protein from Variovorax sp. SCN45

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 150 DCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSE-EKLVGIITSTDFVKLFGSDWAFN 208
           D M+   +    G  L++    M     + LP+     ++VGI+T  DF +    D   +
Sbjct: 232 DIMSREPISVEFGTPLQEAWALMHERRIKALPITDRTRRVVGIVTQADFFRQL--DLQHH 289

Query: 209 HMKTGNIREITNVR----------IQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVV 258
               G +R++              +  IM   +   +++  +VD +   +E     +P++
Sbjct: 290 EGIAGKLRDLIRATRTVMSNKPEVVGQIMTRQVRVASADRPVVDLVPLFSEGGHHHIPII 349

Query: 259 DGEK-LIGLITEKDIVKCIYK 278
           DGEK L G+IT+ D V+ +Y+
Sbjct: 350 DGEKRLAGMITQSDFVRALYR 370



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 21/135 (15%)

Query: 86  EIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYLKDQVDEK 145
           +IM+   + ++    L E   L  +++I  +P+ D++  ++  + + D  + L  Q  E 
Sbjct: 232 DIMSREPISVEFGTPLQEAWALMHERRIKALPITDRTRRVVGIVTQADFFRQLDLQHHEG 291

Query: 146 L--------------------LVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVV-S 184
           +                    +V   MT  V  A+    + D+       G   +P++  
Sbjct: 292 IAGKLRDLIRATRTVMSNKPEVVGQIMTRQVRVASADRPVVDLVPLFSEGGHHHIPIIDG 351

Query: 185 EEKLVGIITSTDFVK 199
           E++L G+IT +DFV+
Sbjct: 352 EKRLAGMITQSDFVR 366



 Score = 31.6 bits (70), Expect = 3e-05
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 216 REITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVD-GEKLIGLITEKDIVK 274
           R +  +   DIM    +SV     L +A   M+E  I  LP+ D   +++G++T+ D  +
Sbjct: 223 RRLGTLHCADIMSREPISVEFGTPLQEAWALMHERRIKALPITDRTRRVVGIVTQADFFR 282



 Score = 31.6 bits (70), Expect = 3e-05
 Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 10/127 (7%)

Query: 19  TKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLG-------GGSKYNLVKFK 71
           T + EA  +M +  ++ + + D  T RV GI+T  D    L         G   +L++  
Sbjct: 245 TPLQEAWALMHERRIKALPITDR-TRRVVGIVTQADFFRQLDLQHHEGIAGKLRDLIRA- 302

Query: 72  HNHNMLSAINEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINE 131
               ++S   E V +IMT  V +   +  + +++ LF +     +P+ID    L   I +
Sbjct: 303 -TRTVMSNKPEVVGQIMTRQVRVASADRPVVDLVPLFSEGGHHHIPIIDGEKRLAGMITQ 361

Query: 132 RDVIKYL 138
            D ++ L
Sbjct: 362 SDFVRAL 368