Pairwise Alignments

Query, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 153 a.a., Predicted transcriptional regulator, contains C-terminal CBS domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 55.8 bits (133), Expect = 5e-13
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 5/121 (4%)

Query: 84  VKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYL---KD 140
           V   MT N+     +  +D V+ +  +K+I G PV+D    L+  I+E D +K +   K 
Sbjct: 23  VSNHMTTNLTTFHPDDTIDHVVQVLTQKRISGAPVLDDGQNLVGIISEVDCLKEIIRGKY 82

Query: 141 QVDEKLL--VKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFV 198
               ++   V++ MT++VV   P   + D A   L    RR PV+ + KL+G I+ +D +
Sbjct: 83  NNTPRMAGRVREHMTKDVVTMDPEVTIFDAAHRFLELKIRRFPVLKDGKLLGQISLSDII 142

Query: 199 K 199
           +
Sbjct: 143 R 143



 Score = 48.5 bits (114), Expect = 8e-11
 Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 141 QVDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSE-EKLVGIITSTDFVK 199
           +  + +LV + MT N+    P + +  V + + +      PV+ + + LVGII+  D +K
Sbjct: 16  RASQPILVSNHMTTNLTTFHPDDTIDHVVQVLTQKRISGAPVLDDGQNLVGIISEVDCLK 75

Query: 200 LFGSDWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVD 259
                      K  N   +   R+++ M  ++V++   + + DA  +  EL I   PV+ 
Sbjct: 76  ------EIIRGKYNNTPRMAG-RVREHMTKDVVTMDPEVTIFDAAHRFLELKIRRFPVLK 128

Query: 260 GEKLIGLITEKDIVKCI 276
             KL+G I+  DI++ +
Sbjct: 129 DGKLLGQISLSDIIRAM 145



 Score = 29.3 bits (64), Expect = 5e-05
 Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 221 VRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVD-GEKLIGLITEKDIVKCIYK 278
           + + + M TN+ +   +  +   ++ + +  I   PV+D G+ L+G+I+E D +K I +
Sbjct: 21  ILVSNHMTTNLTTFHPDDTIDHVVQVLTQKRISGAPVLDDGQNLVGIISEVDCLKEIIR 79