Pairwise Alignments

Query, 186 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 384 a.a., nitrite transporter, HPP family (from data) from Pseudomonas putida KT2440

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 8/125 (6%)

Query: 5   LSVTEAMSTPVATVTLDTTAYDVANILKEKGIGCLVVLNDAGKPVGIITERDLALGVVSR 64
           ++    MS  V   T DTT      +L    +  L VL   GK VGI++  DL    + R
Sbjct: 239 ITAASVMSRDVQFATPDTTLEQAWKMLASHHLKTLPVLQH-GKLVGIVSLSDLVGPAMQR 297

Query: 65  NLKS-------KEVIVEEISSSKLIAIAPKSTLMDAARKMDTENVKRLPVIDGDELLGIV 117
              S       + V + ++ S ++++++ +  L      +  + +  LPV+DGD+L+G++
Sbjct: 298 GRFSWRGLFGRQAVRMAQVMSRRVVSVSSQHPLERLLPLLCEQGLHCLPVLDGDKLVGVI 357

Query: 118 TVSDI 122
           T +D+
Sbjct: 358 TQTDL 362



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 7   VTEAMSTPVATVTLDTTAYDVANILKEKGIGCLVVLNDAGKPVGIITERDLALGVVSRNL 66
           + + MS  V +V+       +  +L E+G+ CL VL D  K VG+IT+ DL  G + R L
Sbjct: 313 MAQVMSRRVVSVSSQHPLERLLPLLCEQGLHCLPVL-DGDKLVGVITQTDLIAG-LKRQL 370

Query: 67  KSK 69
            SK
Sbjct: 371 LSK 373