Pairwise Alignments

Query, 272 a.a., formylmethanofuran dehydrogenase subunit C from Methanococcus maripaludis S2

Subject, 235 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 56.2 bits (134), Expect = 6e-13
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 76  IGEKMTSGEIVVNGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAENYVGS 135
           + E M SG + V GDA    G    GG + V+G+A +  G ++KG +I++ G+  +   S
Sbjct: 86  VAENMMSGFVHVRGDASQSAGATAHGGMLVVDGNASARCGISMKGVDIVVKGSIGHM--S 143

Query: 136 AYRGDWRGMSGGKITITGNAGSELGEYLKGGTIVIKGNTK 175
           A+ G       G + + G+AG  LG+ L    + ++G  K
Sbjct: 144 AFMG-----QSGSLVVLGDAGEALGDSLYEAKLFVRGTVK 178



 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 7/128 (5%)

Query: 85  IVVNGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAENYVGSAYRGDWRGM 144
           + + G+ G Y         + ++G+A   V +N+  G + + G+A    G+   G     
Sbjct: 57  VEIEGNVGYYCAGMNAEASVIIHGNAGQGVAENMMSGFVHVRGDASQSAGATAHG----- 111

Query: 145 SGGKITITGNAGSELGEYLKGGTIVIKGNTKIMPGIHQNGGMIIIEGDIEGRAGGEMMKG 204
             G + + GNA +  G  +KG  IV+KG+   M       G +++ GD     G  + + 
Sbjct: 112 --GMLVVDGNASARCGISMKGVDIVVKGSIGHMSAFMGQSGSLVVLGDAGEALGDSLYEA 169

Query: 205 AIVVYGKI 212
            + V G +
Sbjct: 170 KLFVRGTV 177



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 10/117 (8%)

Query: 103 KITVNGDAESWVGQNLKGGEIIINGNA-------ENYVGSAYRGDWRGMSGGKITITGNA 155
           K T   +A  W   N  G   +  G A       E  VG    G     +   + I GNA
Sbjct: 26  KATAESNARRWRVLNPNGRHAVAVGLAMPLTVEIEGNVGYYCAGM---NAEASVIIHGNA 82

Query: 156 GSELGEYLKGGTIVIKGNTKIMPGIHQNGGMIIIEGDIEGRAGGEMMKGAIVVYGKI 212
           G  + E +  G + ++G+     G   +GGM++++G+   R G  M    IVV G I
Sbjct: 83  GQGVAENMMSGFVHVRGDASQSAGATAHGGMLVVDGNASARCGISMKGVDIVVKGSI 139



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 8/135 (5%)

Query: 88  NGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAENYVGSAYRGDWRGMSGG 147
           NG   + +G+ M    + + G+   +         +II+GNA   V          M  G
Sbjct: 42  NGRHAVAVGLAMPL-TVEIEGNVGYYCAGMNAEASVIIHGNAGQGVAE-------NMMSG 93

Query: 148 KITITGNAGSELGEYLKGGTIVIKGNTKIMPGIHQNGGMIIIEGDIEGRAGGEMMKGAIV 207
            + + G+A    G    GG +V+ GN     GI   G  I+++G I   +      G++V
Sbjct: 94  FVHVRGDASQSAGATAHGGMLVVDGNASARCGISMKGVDIVVKGSIGHMSAFMGQSGSLV 153

Query: 208 VYGKILEPLPSFKFE 222
           V G   E L    +E
Sbjct: 154 VLGDAGEALGDSLYE 168



 Score = 31.2 bits (69), Expect = 2e-05
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 5/98 (5%)

Query: 75  RIGEKMTSGEIVVNGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAENY-- 132
           R G  M   +IVV G  G       + G + V GDA   +G +L   ++ + G  ++   
Sbjct: 123 RCGISMKGVDIVVKGSIGHMSAFMGQSGSLVVLGDAGEALGDSLYEAKLFVRGTVKSLGA 182

Query: 133 --VGSAYRGDWRGMSGGKITITGNAGS-ELGEYLKGGT 167
             +    R + + +   K+   G  G+ ++ E+ + G+
Sbjct: 183 DCIEKEMRDEHKALLAQKLKAAGLEGAVDVSEFKRYGS 220