Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 161 a.a., NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) from Sphingobium sp. HT1-2

 Score = 53.1 bits (126), Expect = 5e-12
 Identities = 23/63 (36%), Positives = 32/63 (50%)

Query: 112 QSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAIEL 171
           + +C+ C+ CE +CP  AI +E +  +  S       I    C+ CG C E CP DAI  
Sbjct: 59  EERCIACKLCEAICPAQAITIEAQPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVE 118

Query: 172 IPN 174
            PN
Sbjct: 119 GPN 121



 Score = 45.8 bits (107), Expect = 7e-10
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 151 KDDCVLCGICAEYCPADAI--ELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNA 208
           ++ C+ C +C   CPA AI  E  P D  +          ID+  C+YC  C++ACP +A
Sbjct: 59  EERCIACKLCEAICPAQAITIEAQPRDDGS---RRTTRYDIDMTKCIYCGFCQEACPVDA 115

Query: 209 I-EAICYKCPLASKIKKPELYGEIKGQTNIDK 239
           I E   ++   A++ ++  +Y + K   N DK
Sbjct: 116 IVEGPNFE--FATETREELIYDKAKLLENGDK 145



 Score = 45.8 bits (107), Expect = 7e-10
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 271 EPACNACGACISVCPCNALVFP-QPEKQGDK-VPNVVVNQDVCILCGACTHSCPVDAL 326
           E  C AC  C ++CP  A+    QP   G +      ++   CI CG C  +CPVDA+
Sbjct: 59  EERCIACKLCEAICPAQAITIEAQPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 116



 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 10/71 (14%)

Query: 192 DACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANI 251
           + C+ CK+CE  CP  AI       P     ++   Y       +ID   C+ CG+C   
Sbjct: 60  ERCIACKLCEAICPAQAITIEAQ--PRDDGSRRTTRY-------DIDMTKCIYCGFCQEA 110

Query: 252 CPADAIEVEKP 262
           CP DAI VE P
Sbjct: 111 CPVDAI-VEGP 120



 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 32  CVGCGICSEICPTSAI--EMGPLGAIFKGDIDAPKLDIS-EKCVLCGMCACACPFDAVKL 88
           C+ C +C  ICP  AI  E  P      G     + DI   KC+ CG C  ACP DA+  
Sbjct: 62  CIACKLCEAICPAQAITIEAQPRD---DGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVE 118

Query: 89  SINDKPITE 97
             N +  TE
Sbjct: 119 GPNFEFATE 127



 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 7/59 (11%)

Query: 239 KELCVSCGWCANICPADAIEVE-KPFEG------ELIIDEPACNACGACISVCPCNALV 290
           +E C++C  C  ICPA AI +E +P +          ID   C  CG C   CP +A+V
Sbjct: 59  EERCIACKLCEAICPAQAITIEAQPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 117



 Score = 37.7 bits (86), Expect = 2e-07
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 48  EMGPLGAIFKGDIDAPKL-DISEKCVLCGMCACACPFDAVKLSI--NDKPITEMPQYPKI 104
           E  P+   F+G+    +  +  E+C+ C +C   CP  A+ +     D       +Y   
Sbjct: 38  EKNPISPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAQPRDDGSRRTTRY--- 94

Query: 105 KRGIELNQSKCVLCEQCELVCPQCAI 130
               +++ +KC+ C  C+  CP  AI
Sbjct: 95  ----DIDMTKCIYCGFCQEACPVDAI 116



 Score = 32.7 bits (73), Expect = 6e-06
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 17  RSGVEKRVLKWD-DCT-CVGCGICSEICPTSAIEMGP 51
           R    +R  ++D D T C+ CG C E CP  AI  GP
Sbjct: 84  RDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 120



 Score = 25.4 bits (54), Expect = 0.001
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 308 QDVCILCGACTHSCPVDALTVK 329
           ++ CI C  C   CP  A+T++
Sbjct: 59  EERCIACKLCEAICPAQAITIE 80