Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 154 a.a., NADH-quinone oxidoreductase subunit I from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 55.8 bits (133), Expect = 7e-13
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 68  SEKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGI--ELNQSKCVLCEQCELVC 125
           +E+C  CG+CA ACP +A+ ++  ++   E   Y + K  +  E+N  +C+ C  CE  C
Sbjct: 56  AERCTACGLCAVACPAEAITMTAGERKAGEEHLYREEKYAVTYEVNMLRCIFCGLCEEAC 115

Query: 126 PQCAI 130
           P+ AI
Sbjct: 116 PKAAI 120



 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 11/94 (11%)

Query: 127 QCAIDVEREVPERKSLVLGEITIKKDD-----CVLCGICAEYCPADAIELIPNDMNALSL 181
           +  I    +  ER     G   +K+D+     C  CG+CA  CPA+AI +   +  A   
Sbjct: 27  KATIQYPEQTRERSEHWRGLHVLKRDEKGAERCTACGLCAVACPAEAITMTAGERKAGEE 86

Query: 182 NPIADIK------IDLDACVYCKVCEKACPHNAI 209
           +   + K      +++  C++C +CE+ACP  AI
Sbjct: 87  HLYREEKYAVTYEVNMLRCIFCGLCEEACPKAAI 120



 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 9/69 (13%)

Query: 274 CNACGACISVCPCNALVFPQPEKQGDK---------VPNVVVNQDVCILCGACTHSCPVD 324
           C ACG C   CP  A+     E++  +              VN   CI CG C  +CP  
Sbjct: 59  CTACGLCAVACPAEAITMTAGERKAGEEHLYREEKYAVTYEVNMLRCIFCGLCEEACPKA 118

Query: 325 ALTVKRTKI 333
           A+ ++  KI
Sbjct: 119 AIFLQDDKI 127



 Score = 39.3 bits (90), Expect = 6e-08
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 19/99 (19%)

Query: 109 ELNQSKCVLCEQCELVCPQCAIDV---------EREVPERKSLVLGEITIKKDDCVLCGI 159
           E    +C  C  C + CP  AI +         E    E K  V  E+ + +  C+ CG+
Sbjct: 53  EKGAERCTACGLCAVACPAEAITMTAGERKAGEEHLYREEKYAVTYEVNMLR--CIFCGL 110

Query: 160 CAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCK 198
           C E CP  AI         L  + IA  + + D  +Y K
Sbjct: 111 CEEACPKAAI--------FLQDDKIAPARFERDEFIYGK 141



 Score = 38.9 bits (89), Expect = 8e-08
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 7/64 (10%)

Query: 32  CVGCGICSEICPTSAIEM--GPLGA----IFKGDIDAPKLDISE-KCVLCGMCACACPFD 84
           C  CG+C+  CP  AI M  G   A    +++ +  A   +++  +C+ CG+C  ACP  
Sbjct: 59  CTACGLCAVACPAEAITMTAGERKAGEEHLYREEKYAVTYEVNMLRCIFCGLCEEACPKA 118

Query: 85  AVKL 88
           A+ L
Sbjct: 119 AIFL 122



 Score = 37.7 bits (86), Expect = 2e-07
 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 15/71 (21%)

Query: 240 ELCVSCGWCANICPADAIEV----EKPFEGELIIDEP----------ACNACGACISVCP 285
           E C +CG CA  CPA+AI +     K  E  L  +E            C  CG C   CP
Sbjct: 57  ERCTACGLCAVACPAEAITMTAGERKAGEEHLYREEKYAVTYEVNMLRCIFCGLCEEACP 116

Query: 286 CNALVFPQPEK 296
             A +F Q +K
Sbjct: 117 -KAAIFLQDDK 126