Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 78.2 bits (191), Expect = 1e-19
 Identities = 53/165 (32%), Positives = 70/165 (42%), Gaps = 38/165 (23%)

Query: 104 IKRGIELNQSKCVLCEQCELVCPQCAIDVE-REVPERKSLVLGEITIKKDDCVLCGICAE 162
           I   IE+N   C+LC +C  VCP  AI     EVP+  +            CV C  C E
Sbjct: 27  ISNKIEINPEICILCNRCLEVCPVTAISSNFPEVPDIDN-----------KCVYCNTCVE 75

Query: 163 YCPADAIELIPNDM-----NALSLNPIADIKIDLDA--CVYCKVCEKACPHNAIEAICYK 215
            CP DAI++    +     N +  N +   K+D +   CV C VC K CP  AI      
Sbjct: 76  TCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAIS----- 130

Query: 216 CPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANICPADAIEVE 260
                         E     + + + CV CG C  ICPA AI++E
Sbjct: 131 --------------ESDDTISFNMDKCVLCGHCEEICPAKAIKLE 161



 Score = 76.6 bits (187), Expect = 4e-19
 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 27/145 (18%)

Query: 32  CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKL-DISEKCVLCGMCACACPFDAVKLSI 90
           C+ C  C E+CP +AI             + P++ DI  KCV C  C   CP DA+K++ 
Sbjct: 38  CILCNRCLEVCPVTAISS-----------NFPEVPDIDNKCVYCNTCVETCPVDAIKITK 86

Query: 91  NDKPITE----MPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGE 146
               +      +    K K+ ++ N+ KCV+C  C   CP  AI    +           
Sbjct: 87  TRVRVENGNLIIENRLKSKK-LDYNRKKCVMCLVCTKNCPFEAISESDDT---------- 135

Query: 147 ITIKKDDCVLCGICAEYCPADAIEL 171
           I+   D CVLCG C E CPA AI+L
Sbjct: 136 ISFNMDKCVLCGHCEEICPAKAIKL 160



 Score = 66.6 bits (161), Expect = 4e-16
 Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 35/156 (22%)

Query: 64  KLDIS-EKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCE 122
           K++I+ E C+LC  C   CP  A+         +  P+ P I        +KCV C  C 
Sbjct: 30  KIEINPEICILCNRCLEVCPVTAIS--------SNFPEVPDI-------DNKCVYCNTCV 74

Query: 123 LVCPQCAIDVER---EVPERKSLVLGEITIKKDD-----CVLCGICAEYCPADAIELIPN 174
             CP  AI + +    V     ++   +  KK D     CV+C +C + CP +AI    +
Sbjct: 75  ETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISESDD 134

Query: 175 DMNALSLNPIADIKIDLDACVYCKVCEKACPHNAIE 210
                       I  ++D CV C  CE+ CP  AI+
Sbjct: 135 -----------TISFNMDKCVLCGHCEEICPAKAIK 159



 Score = 63.5 bits (153), Expect = 3e-15
 Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 23/113 (20%)

Query: 29  DCTCVGCGICSEICPTSAIEMGPL-------GAIFKGDIDAPKLDIS-EKCVLCGMCACA 80
           D  CV C  C E CP  AI++            I +  + + KLD + +KCV+C +C   
Sbjct: 64  DNKCVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKN 123

Query: 81  CPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVE 133
           CPF+A+  S +                I  N  KCVLC  CE +CP  AI +E
Sbjct: 124 CPFEAISESDDT---------------ISFNMDKCVLCGHCEEICPAKAIKLE 161



 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 42/158 (26%), Positives = 61/158 (38%), Gaps = 42/158 (26%)

Query: 187 IKIDLDACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCG 246
           I+I+ + C+ C  C + CP  AI +   + P                  +ID + CV C 
Sbjct: 31  IEINPEICILCNRCLEVCPVTAISSNFPEVP------------------DIDNK-CVYCN 71

Query: 247 WCANICPADAIEVEKPF----EGELIIDE-----------PACNACGACISVCPCNALVF 291
            C   CP DAI++ K       G LII+              C  C  C   CP  A+  
Sbjct: 72  TCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAI-- 129

Query: 292 PQPEKQGDKVPNVVVNQDVCILCGACTHSCPVDALTVK 329
                  +    +  N D C+LCG C   CP  A+ ++
Sbjct: 130 ------SESDDTISFNMDKCVLCGHCEEICPAKAIKLE 161



 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 13/107 (12%)

Query: 231 IKGQTNIDKELCVSCGWCANICPADAIEVEKPFEGELIIDEPACNACGACISVCPCNALV 290
           I  +  I+ E+C+ C  C  +CP  AI    P   E+   +  C  C  C+  CP +A+ 
Sbjct: 27  ISNKIEINPEICILCNRCLEVCPVTAISSNFP---EVPDIDNKCVYCNTCVETCPVDAIK 83

Query: 291 FPQPEKQGD----------KVPNVVVNQDVCILCGACTHSCPVDALT 327
             +   + +          K   +  N+  C++C  CT +CP +A++
Sbjct: 84  ITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAIS 130



 Score = 50.4 bits (119), Expect = 3e-11
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)

Query: 269 IDEPACNACGACISVCPCNALVFPQPEKQGDKVPNVVVNQDVCILCGACTHSCPVDALTV 328
           I+   C  C  C+ VCP  A+    PE     VP++    + C+ C  C  +CPVDA+ +
Sbjct: 33  INPEICILCNRCLEVCPVTAISSNFPE-----VPDI---DNKCVYCNTCVETCPVDAIKI 84

Query: 329 KRTKINMTEAN 339
            +T++ +   N
Sbjct: 85  TKTRVRVENGN 95



 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 12/81 (14%)

Query: 8   ENDGVIEISRSGVEKRVLKWDDCTCVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDI 67
           EN  +I  +R  ++ + L ++   CV C +C++ CP  AI        F  D        
Sbjct: 92  ENGNLIIENR--LKSKKLDYNRKKCVMCLVCTKNCPFEAISESDDTISFNMD-------- 141

Query: 68  SEKCVLCGMCACACPFDAVKL 88
             KCVLCG C   CP  A+KL
Sbjct: 142 --KCVLCGHCEEICPAKAIKL 160