Pairwise Alignments
Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Score = 136 bits (342), Expect = 1e-36
Identities = 100/346 (28%), Positives = 139/346 (40%), Gaps = 76/346 (21%)
Query: 32 CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDISEKCVLCGMCACACPFDAVKL--- 88
C C C CPT A+++ P + C LCG C CP DA+ L
Sbjct: 9 CYMCKACENSCPTEALKLNPF----------------KVCQLCGNCVNVCPNDALNLREI 52
Query: 89 SINDKPITEMPQYPK-----------IKRGIELNQSK----CVLCEQCELVCPQCAIDVE 133
+N K I ++ +P +++ K CV C +C CP + +E
Sbjct: 53 ELNGKTIKQIAYFPTKCDLCGECVKVCPNNLKIENDKLKGFCVGCMKCVDACPDSYVGME 112
Query: 134 REV-PERKSLVLGEITIK-KDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDL 191
V P ++++ L + I +DCV CG+C CP + ALS+ + +D
Sbjct: 113 GVVEPAKRNITLPKEPIAVTEDCVGCGVCISECP----------VGALSIEGEKAV-VDK 161
Query: 192 DACVYCKVCEKACPHNAIEAICYKCPLASK-------------------IKKPELYGEIK 232
D+C+YC +C + CP NAI K P K K P +
Sbjct: 162 DSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLN 221
Query: 233 GQTNIDKELCVSCGWCANICPADAIEV------EKPFEGELII-DEPACNACGACISVCP 285
+ + C +CG C CP DAIE+ KP E I+ DE C CG C CP
Sbjct: 222 EMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCP 281
Query: 286 CNALVFPQP---EKQGDKVPNVVVNQDVCILCGACTHSCPVDALTV 328
NA+ P E K +CI CGAC SCP DAL +
Sbjct: 282 NNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDALRI 327
Score = 127 bits (320), Expect = 4e-34
Identities = 89/306 (29%), Positives = 133/306 (43%), Gaps = 48/306 (15%)
Query: 32 CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPK--LDISEKCVLCGMCACACPFDAVKLS 89
CVGC C + CP S + M + K +I PK + ++E CV CG+C CP A+ +
Sbjct: 94 CVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSIE 153
Query: 90 INDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITI 149
+K + + + C+ C C CP AI V + ++ + + ++
Sbjct: 154 -GEKAVVD--------------KDSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSV 198
Query: 150 KKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAI 209
D C+ CG C + CP D I L N+M + + C C +C+ ACP +AI
Sbjct: 199 DSDLCIGCGDCTDKCPRDLIVL--NEM----------VAVPPKGCPACGLCKAACPVDAI 246
Query: 210 EAIC-YKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANICPADAIEVEKPF----- 263
E + Y P KP I D+E C CG CA CP +AI V P
Sbjct: 247 ELVVEYASP------KPITDEGIVW----DEEKCAYCGPCAIKCPNNAITVVNPKGLEMP 296
Query: 264 ---EGELIIDEPACNACGACISVCPCNALVFPQPEKQGDKVPNVVVNQDVCILCGACTHS 320
+ E + C CGAC+ CP +AL + G + + + ++C CG C +
Sbjct: 297 SRKKTEKANEFKMCIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIET 356
Query: 321 CPVDAL 326
CP D L
Sbjct: 357 CPYDML 362
Score = 104 bits (259), Expect = 4e-27
Identities = 84/314 (26%), Positives = 125/314 (39%), Gaps = 78/314 (24%)
Query: 10 DGVIEISRSGV---EKRVLKWDDCTCVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLD 66
+GV+E ++ + ++ + +DC VGCG+C CP A+ + A+ D
Sbjct: 112 EGVVEPAKRNITLPKEPIAVTEDC--VGCGVCISECPVGALSIEGEKAVVDKD------- 162
Query: 67 ISEKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCP 126
C+ C +CA CP++A+ ++ + P+ K ++ C+ C C CP
Sbjct: 163 ---SCIYCSICAQTCPWNAIFVAGK-----KSPKRDKNIVKFSVDSDLCIGCGDCTDKCP 214
Query: 127 QCAIDVEREVPERKSLVLGE-ITIKKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIA 185
R +VL E + + C CG+C CP DAIEL+ + S PI
Sbjct: 215 ------------RDLIVLNEMVAVPPKGCPACGLCKAACPVDAIELV---VEYASPKPIT 259
Query: 186 DIKI--DLDACVYCKVCEKACPHNAIEAI---------------------CYKCPL---- 218
D I D + C YC C CP+NAI + C +C
Sbjct: 260 DEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQS 319
Query: 219 ----ASKIKKPELYGEIKGQTNIDKELCVSCGWCANICPADAIEV----EKPFEGELIID 270
A +I K G+ + LC SCG C CP D +++ EKP EG
Sbjct: 320 CPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLKLTGKSEKPLEG----- 374
Query: 271 EPACNACGACISVC 284
C C CI C
Sbjct: 375 --FCVMCLKCIEAC 386
Score = 102 bits (253), Expect = 2e-26
Identities = 69/243 (28%), Positives = 104/243 (42%), Gaps = 46/243 (18%)
Query: 108 IELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPAD 167
I++N C +C+ CE CP ++L L + C LCG C CP D
Sbjct: 2 IKINTEDCYMCKACENSCPT------------EALKLNPFKV----CQLCGNCVNVCPND 45
Query: 168 AIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHN------AIEAICYKCPLASK 221
A+ L ++N ++ IA C C C K CP+N ++ C C +
Sbjct: 46 ALNLREIELNGKTIKQIAYFP---TKCDLCGECVKVCPNNLKIENDKLKGFCVGC-MKCV 101
Query: 222 IKKPELYGEIKGQTNIDK-------------ELCVSCGWCANICPADAIEVEKPFEGELI 268
P+ Y ++G K E CV CG C + CP A+ +E + +
Sbjct: 102 DACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSIEGE---KAV 158
Query: 269 IDEPACNACGACISVCPCNALVFPQPEKQGDKVPNVV---VNQDVCILCGACTHSCPVDA 325
+D+ +C C C CP NA +F +K + N+V V+ D+CI CG CT CP D
Sbjct: 159 VDKDSCIYCSICAQTCPWNA-IFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDL 217
Query: 326 LTV 328
+ +
Sbjct: 218 IVL 220
Score = 45.8 bits (107), Expect = 2e-09
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 26/127 (20%)
Query: 6 KDENDGVIEISRSGVE----KRVLKWDDCT-CVGCGICSEICPTSAIEMGPLGAIFKGDI 60
K N+ + ++ G+E K+ K ++ C+ CG C + CP A+ +G I
Sbjct: 279 KCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDALR---IGKIIHNGK 335
Query: 61 DAPKLDISEK-CVLCGMCACACPFDAVKLS-INDKPITEMPQYPKIKRGIELNQSKCVLC 118
+ +++ S C CG C CP+D +KL+ ++KP+ + CV+C
Sbjct: 336 EYERIEFSPNLCDSCGKCIETCPYDMLKLTGKSEKPL----------------EGFCVMC 379
Query: 119 EQCELVC 125
+C C
Sbjct: 380 LKCIEAC 386
Score = 39.3 bits (90), Expect = 2e-07
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 14/66 (21%)
Query: 269 IDEPACNACGACISVCPCNALVFPQPEKQGDKVPNVVVNQDVCILCGACTHSCPVDALTV 328
I+ C C AC + CP AL P K VC LCG C + CP DAL +
Sbjct: 4 INTEDCYMCKACENSCPTEALKL-NPFK-------------VCQLCGNCVNVCPNDALNL 49
Query: 329 KRTKIN 334
+ ++N
Sbjct: 50 REIELN 55
Score = 32.3 bits (72), Expect = 2e-05
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 304 VVVNQDVCILCGACTHSCPVDALTVKRTKI 333
+ +N + C +C AC +SCP +AL + K+
Sbjct: 2 IKINTEDCYMCKACENSCPTEALKLNPFKV 31