Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 53/195 (27%)

Query: 28  DDCTCVGCGICSEICPTSAIEMG-----------------PLGAIFKGDIDAPKLDISEK 70
           DDC C  CG+C ++CPT+AI +                  P+ AI K           EK
Sbjct: 44  DDCIC--CGLCVDVCPTNAISVFKFRDIICEHCGACLNVCPVDAIEKNRFSVDP----EK 97

Query: 71  CVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAI 130
           C+ CG+C+  C    +K   N+ P+  +P+            ++C  C+ C   CPQ AI
Sbjct: 98  CIKCGVCSIFCTIPILK---NEIPVLNVPEVT----------TECNNCKLCIQKCPQKAI 144

Query: 131 DVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKID 190
             E           G+I+I    C LC  C E+CP +A++     + +        IK+D
Sbjct: 145 SFED----------GKISINSK-CNLCLKCVEFCPLNALKSPKESLKSKI------IKVD 187

Query: 191 LDACVYCKVCEKACP 205
           L++C++CK CE+ CP
Sbjct: 188 LNSCIFCKDCEEICP 202



 Score = 84.0 bits (206), Expect = 3e-21
 Identities = 64/193 (33%), Positives = 86/193 (44%), Gaps = 35/193 (18%)

Query: 143 VLGEITIKK-DDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCE 201
           V+GE T  + DDC+ CG+C + CP           NA+S+    DI      C +C  C 
Sbjct: 34  VIGETTNPELDDCICCGLCVDVCPT----------NAISVFKFRDI-----ICEHCGACL 78

Query: 202 KACPHNAIEAI--------CYKCPLASKIKK-PELYGEIKGQTNIDKEL--CVSCGWCAN 250
             CP +AIE          C KC + S     P L  EI    N+ +    C +C  C  
Sbjct: 79  NVCPVDAIEKNRFSVDPEKCIKCGVCSIFCTIPILKNEIP-VLNVPEVTTECNNCKLCIQ 137

Query: 251 ICPADAIEVEKPFEGELIIDEPACNACGACISVCPCNALVFPQPEKQGDKVPNVVVNQDV 310
            CP  AI  E   +G++ I+   CN C  C+  CP NAL  P   K+  K   + V+ + 
Sbjct: 138 KCPQKAISFE---DGKISINSK-CNLCLKCVEFCPLNALKSP---KESLKSKIIKVDLNS 190

Query: 311 CILCGACTHSCPV 323
           CI C  C   CPV
Sbjct: 191 CIFCKDCEEICPV 203



 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 20/115 (17%)

Query: 223 KKPELYGEIKGQTNIDKELCVSCGWCANICPADAIEVEKPFEGELIIDEPACNACGACIS 282
           K PE+ GE    TN + + C+ CG C ++CP +AI V K         +  C  CGAC++
Sbjct: 30  KNPEVIGET---TNPELDDCICCGLCVDVCPTNAISVFK-------FRDIICEHCGACLN 79

Query: 283 VCPCNALVFPQPEKQGDKVPNVVVNQDVCILCGACTHSCPVDALTVKRTKINMTE 337
           VCP +A+     EK         V+ + CI CG C+  C +  L  +   +N+ E
Sbjct: 80  VCPVDAI-----EKN-----RFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPE 124



 Score = 52.8 bits (125), Expect = 8e-12
 Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 41/152 (26%)

Query: 20  VEKRVLKWDDCTCVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKL-DISEKCVLCGMCA 78
           +EK     D   C+ CG+CS  C            I K +I    + +++ +C  C +C 
Sbjct: 86  IEKNRFSVDPEKCIKCGVCSIFCTI---------PILKNEIPVLNVPEVTTECNNCKLCI 136

Query: 79  CACP-----FDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVE 133
             CP     F+  K+SIN                     SKC LC +C   CP  A+   
Sbjct: 137 QKCPQKAISFEDGKISIN---------------------SKCNLCLKCVEFCPLNALKSP 175

Query: 134 REVPERKSLVLGEITIKKDDCVLCGICAEYCP 165
           +E     SL    I +  + C+ C  C E CP
Sbjct: 176 KE-----SLKSKIIKVDLNSCIFCKDCEEICP 202



 Score = 27.7 bits (60), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 17  RSGVEKRVLKWDDCTCVGCGICSEICP 43
           +  ++ +++K D  +C+ C  C EICP
Sbjct: 176 KESLKSKIIKVDLNSCIFCKDCEEICP 202