Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., NADH-quinone oxidoreductase subunit I from Magnetospirillum magneticum AMB-1

 Score = 56.2 bits (134), Expect = 5e-13
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)

Query: 82  PFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKS 141
           P++   LS+  +    + +YP         + +C+ C+ CE +CP  AI +E E  +  S
Sbjct: 37  PYEKGPLSVRFRGEHALRRYPN-------GEERCIACKLCEAICPAQAITIEPEPRDDGS 89

Query: 142 LVLGEITIKKDDCVLCGICAEYCPADAIELIPN 174
                  +    C+ CG+C E CP DAI   PN
Sbjct: 90  RRARRYDLDMTKCIYCGLCQEACPVDAIVEGPN 122



 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 151 KDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAI 209
           ++ C+ C +C   CPA AI + P   +  S        +D+  C+YC +C++ACP +AI
Sbjct: 60  EERCIACKLCEAICPAQAITIEPEPRDDGSRRA-RRYDLDMTKCIYCGLCQEACPVDAI 117



 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 271 EPACNACGACISVCPCNALVF-PQPEKQGDK-VPNVVVNQDVCILCGACTHSCPVDAL 326
           E  C AC  C ++CP  A+   P+P   G +      ++   CI CG C  +CPVDA+
Sbjct: 60  EERCIACKLCEAICPAQAITIEPEPRDDGSRRARRYDLDMTKCIYCGLCQEACPVDAI 117



 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 32  CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDIS-EKCVLCGMCACACPFDAVKLSI 90
           C+ C +C  ICP  AI + P      G   A + D+   KC+ CG+C  ACP DA+    
Sbjct: 63  CIACKLCEAICPAQAITIEPEPRD-DGSRRARRYDLDMTKCIYCGLCQEACPVDAIVEGP 121

Query: 91  NDKPITE 97
           N +  TE
Sbjct: 122 NFEYATE 128



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 48  EMGPLGAIFKGDIDAPKL-DISEKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKR 106
           E GPL   F+G+    +  +  E+C+ C +C   CP  A+  +I  +P        +  R
Sbjct: 39  EKGPLSVRFRGEHALRRYPNGEERCIACKLCEAICPAQAI--TIEPEP---RDDGSRRAR 93

Query: 107 GIELNQSKCVLCEQCELVCPQCAI 130
             +L+ +KC+ C  C+  CP  AI
Sbjct: 94  RYDLDMTKCIYCGLCQEACPVDAI 117



 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 7/59 (11%)

Query: 239 KELCVSCGWCANICPADAIEVE-KPFEG------ELIIDEPACNACGACISVCPCNALV 290
           +E C++C  C  ICPA AI +E +P +          +D   C  CG C   CP +A+V
Sbjct: 60  EERCIACKLCEAICPAQAITIEPEPRDDGSRRARRYDLDMTKCIYCGLCQEACPVDAIV 118



 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 12/72 (16%)

Query: 192 DACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQT-NIDKELCVSCGWCAN 250
           + C+ CK+CE  CP  AI              +P   G  + +  ++D   C+ CG C  
Sbjct: 61  ERCIACKLCEAICPAQAITIE----------PEPRDDGSRRARRYDLDMTKCIYCGLCQE 110

Query: 251 ICPADAIEVEKP 262
            CP DAI VE P
Sbjct: 111 ACPVDAI-VEGP 121



 Score = 33.1 bits (74), Expect = 5e-06
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 17  RSGVEKRVLKWD-DCT-CVGCGICSEICPTSAIEMGP 51
           R    +R  ++D D T C+ CG+C E CP  AI  GP
Sbjct: 85  RDDGSRRARRYDLDMTKCIYCGLCQEACPVDAIVEGP 121



 Score = 25.4 bits (54), Expect = 0.001
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 308 QDVCILCGACTHSCPVDALTVK 329
           ++ CI C  C   CP  A+T++
Sbjct: 60  EERCIACKLCEAICPAQAITIE 81