Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 208 a.a., ferredoxin-like protein from Escherichia coli ECRC62

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 13/102 (12%)

Query: 229 GEIKGQTNIDKELCVSCG--WCANICPADAIEVEKPFEGELIIDEPACNACGACISVCPC 286
           G + G  N   + C  C    C N+CP  AI  ++  EG + +D   C  C AC + CP 
Sbjct: 110 GGLYGDLNYTADTCRQCKEPQCVNVCPIGAITWQQK-EGCITVDHKRCIGCSACTTACPW 168

Query: 287 NALVFPQPEKQGDKVPNVVVNQDVCILCGACTHSCPVDALTV 328
                    K+  K          C+LCG C ++CP  AL +
Sbjct: 169 MMATVNTESKKSSK----------CVLCGECANACPTGALKI 200



 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 39/171 (22%), Positives = 53/171 (30%), Gaps = 47/171 (27%)

Query: 22  KRVLKWDDCTCVGCGICSEICPTSAIEMGPLGAIFK------------------GDIDAP 63
           K VL      C GC  C   C       G +G  F                   G +   
Sbjct: 58  KGVLVTQRARCTGCHRCEISCTN--FNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGD 115

Query: 64  KLDISEKCVLCG--MCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQC 121
               ++ C  C    C   CP  A+     +  IT             ++  +C+ C  C
Sbjct: 116 LNYTADTCRQCKEPQCVNVCPIGAITWQQKEGCIT-------------VDHKRCIGCSAC 162

Query: 122 ELVCPQCAIDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAIELI 172
              CP     V  E            + K   CVLCG CA  CP  A+++I
Sbjct: 163 TTACPWMMATVNTE------------SKKSSKCVLCGECANACPTGALKII 201



 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 13/69 (18%)

Query: 28  DDCTCVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDISEKCVLCGMCACACPFDAVK 87
           D   C+GC  C+  CP     +         + ++ K   S KCVLCG CA ACP  A+K
Sbjct: 152 DHKRCIGCSACTTACPWMMATV---------NTESKK---SSKCVLCGECANACPTGALK 199

Query: 88  LSINDKPIT 96
           + I  K IT
Sbjct: 200 I-IEWKDIT 207



 Score = 38.5 bits (88), Expect = 2e-07
 Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 49/173 (28%)

Query: 106 RGIELNQ-SKCVLCEQCELVCPQ----------CAIDVEREVPERKSLV------LGEIT 148
           +G+ + Q ++C  C +CE+ C              I + R      + V       G++ 
Sbjct: 58  KGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLN 117

Query: 149 IKKDDCVLCGI--CAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPH 206
              D C  C    C   CP  AI     +           I +D   C+ C  C  ACP 
Sbjct: 118 YTADTCRQCKEPQCVNVCPIGAITWQQKE---------GCITVDHKRCIGCSACTTACPW 168

Query: 207 NAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANICPADAIEV 259
                      + ++ KK                 CV CG CAN CP  A+++
Sbjct: 169 -------MMATVNTESKK--------------SSKCVLCGECANACPTGALKI 200



 Score = 34.3 bits (77), Expect = 3e-06
 Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 23/103 (22%)

Query: 115 CVLCE--QCELVCPQCAIDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAIELI 172
           C  C+  QC  VCP  AI  +++         G IT+    C+ C  C   CP     + 
Sbjct: 123 CRQCKEPQCVNVCPIGAITWQQKE--------GCITVDHKRCIGCSACTTACPWMMATVN 174

Query: 173 PNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAIEAICYK 215
                +               CV C  C  ACP  A++ I +K
Sbjct: 175 TESKKS-------------SKCVLCGECANACPTGALKIIEWK 204