Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 231 a.a., ferredoxin-type protein NapG from Escherichia coli ECRC62

 Score = 60.5 bits (145), Expect = 4e-14
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 27/183 (14%)

Query: 33  VGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDISEKCVLCGMCACACPFDAVKLSIND 92
           V  G+  +    S + + P GAI +          +  CV CG C  ACP+D +KL+   
Sbjct: 30  VALGLQQQTARASGVRLRPPGAINENAF-------ASACVRCGQCVQACPYDTLKLATLA 82

Query: 93  KPITEMPQYPKIKRGIELNQSKCVLCEQ--CELVCPQCAIDVEREVPERKSLVLGEITIK 150
             ++    Y  + R I      C +CE   C  VCP  A+D E E  +   + L  + + 
Sbjct: 83  SGLSAGTPY-FVARDI-----PCEMCEDIPCAKVCPSGALDREIESIDDARMGLA-VLVD 135

Query: 151 KDDC-----VLCGICAEYCP----ADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCE 201
           +++C     + C +C   CP    A  +EL  N         +    +  DAC  C  CE
Sbjct: 136 QENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLP--TVHSDACTGCGKCE 193

Query: 202 KAC 204
           K C
Sbjct: 194 KVC 196



 Score = 42.7 bits (99), Expect = 9e-09
 Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 24/161 (14%)

Query: 193 ACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANIC 252
           ACV C  C +ACP++ ++       LAS +     Y   +   +I  E+C     CA +C
Sbjct: 60  ACVRCGQCVQACPYDTLKL----ATLASGLSAGTPYFVAR---DIPCEMCEDIP-CAKVC 111

Query: 253 PADAI--EVEKPFEGEL----IIDEPAC-----NACGACISVCP----CNALVFPQPEKQ 297
           P+ A+  E+E   +  +    ++D+  C       C  C   CP       L   +  + 
Sbjct: 112 PSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRT 171

Query: 298 GDKVPNV-VVNQDVCILCGACTHSCPVDALTVKRTKINMTE 337
           G     +  V+ D C  CG C   C ++   +K   +++ +
Sbjct: 172 GKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAK 212



 Score = 41.2 bits (95), Expect = 3e-08
 Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 21/155 (13%)

Query: 32  CVGCGICSEICPTSAIEMGPLGA-IFKGDIDAPKLDISEKCVLCG--MCACACPFDAVKL 88
           CV CG C + CP   +++  L + +  G       DI   C +C    CA  CP  A+  
Sbjct: 61  CVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDI--PCEMCEDIPCAKVCPSGALDR 118

Query: 89  SINDKPITEMPQYPKIKRGIELNQSKC-----VLCEQCELVCPQC--AIDVEREVPERKS 141
            I      E     ++   + ++Q  C     + C+ C   CP+   AI +E E   R  
Sbjct: 119 EI------ESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTG 172

Query: 142 LVLGEI-TIKKDDCVLCGICAEYCPAD--AIELIP 173
                + T+  D C  CG C + C  +  AI+++P
Sbjct: 173 KHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLP 207



 Score = 37.4 bits (85), Expect = 4e-07
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 26/120 (21%)

Query: 242 CVSCGWCANICPADAIEVEKPFEG------ELIIDEPACNACG--ACISVCPCNALVFPQ 293
           CV CG C   CP D +++     G        +  +  C  C    C  VCP  AL    
Sbjct: 61  CVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGAL---- 116

Query: 294 PEKQGDKVPN------VVVNQDVC-----ILCGACTHSCPV--DALTVKRTKINMTEANA 340
            +++ + + +      V+V+Q+ C     + C  C   CP   +A+T++  +   T  +A
Sbjct: 117 -DREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHA 175