Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 180 a.a., formate hydrogenlyase subunit HycF from Escherichia coli ECRC62

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 8/103 (7%)

Query: 243 VSCGWCANICPADAIEVEKPFEGELIIDEPACNACGACISVCPCNALVFPQPEKQGDKVP 302
           +  G   +  P + I V+K F G+   +   C  C AC++ CP NAL        G+   
Sbjct: 9   IKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETDLATGELAW 68

Query: 303 NVVVNQDVCILCGACTHSCPVDALTVKRTKINMTEANAPAWKK 345
               N   CI CG C   CP  A+ + +      E     WKK
Sbjct: 69  E--FNLGRCIFCGRCEEVCPTAAIKLSQ------EYELAVWKK 103



 Score = 43.1 bits (100), Expect = 5e-09
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 109 ELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEIT--IKKDDCVLCGICAEYCPA 166
           E N  +C+ C  C   CP  A+ VE +      L  GE+        C+ CG C E CP 
Sbjct: 34  EQNPQQCIGCAACVNACPSNALTVETD------LATGELAWEFNLGRCIFCGRCEEVCPT 87

Query: 167 DAIEL 171
            AI+L
Sbjct: 88  AAIKL 92



 Score = 43.1 bits (100), Expect = 5e-09
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 13/71 (18%)

Query: 194 CVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANICP 253
           C+ C  C  ACP NA+     +  LA+        GE+  + N+ +  C+ CG C  +CP
Sbjct: 40  CIGCAACVNACPSNALTV---ETDLAT--------GELAWEFNLGR--CIFCGRCEEVCP 86

Query: 254 ADAIEVEKPFE 264
             AI++ + +E
Sbjct: 87  TAAIKLSQEYE 97



 Score = 42.7 bits (99), Expect = 7e-09
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 232 KGQTNIDKELCVSCGWCANICPADAIEVEKPF-EGELI--IDEPACNACGACISVCPCNA 288
           +G+   + + C+ C  C N CP++A+ VE     GEL    +   C  CG C  VCP  A
Sbjct: 30  RGKPEQNPQQCIGCAACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAA 89

Query: 289 LVFPQ 293
           +   Q
Sbjct: 90  IKLSQ 94



 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 69  EKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQC 128
           ++C+ C  C  ACP +A+ +   D    E+          E N  +C+ C +CE VCP  
Sbjct: 38  QQCIGCAACVNACPSNALTVE-TDLATGELAW--------EFNLGRCIFCGRCEEVCPTA 88

Query: 129 AIDVERE 135
           AI + +E
Sbjct: 89  AIKLSQE 95



 Score = 40.8 bits (94), Expect = 3e-08
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 11/87 (12%)

Query: 32  CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDISEKCVLCGMCACACPFDAVKLSIN 91
           C+GC  C   CP++A+ +     +  G++ A + ++  +C+ CG C   CP  A+KLS  
Sbjct: 40  CIGCAACVNACPSNALTVET--DLATGEL-AWEFNLG-RCIFCGRCEEVCPTAAIKLS-- 93

Query: 92  DKPITEMPQYPKIKRGIELNQSKCVLC 118
                +  +    K+   L QS+ VLC
Sbjct: 94  -----QEYELAVWKKEDFLQQSRFVLC 115



 Score = 36.2 bits (82), Expect = 7e-07
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 154 CVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAIE 210
           C+ C  C   CP++A+ +  +    L+   +A  + +L  C++C  CE+ CP  AI+
Sbjct: 40  CIGCAACVNACPSNALTVETD----LATGELA-WEFNLGRCIFCGRCEEVCPTAAIK 91



 Score = 32.7 bits (73), Expect = 7e-06
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 32  CVGCGICSEICPTSAIEMG---PLGAIFKGDIDAPKLDISEKCVLCGMCACACPFDAVK 87
           C+ CG C E+CPT+AI++     L    K D          + VLC    C  PF   K
Sbjct: 75  CIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQ-----QSRFVLCSCRVCNRPFAVQK 128