Pairwise Alignments

Query, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 180 a.a., NADH-quinone oxidoreductase subunit I from Acinetobacter radioresistens SK82

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 66  DISEKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVC 125
           D  E+CV C +CA ACP   + L   +K   +   YP+  R   +N S+C+ C  CE  C
Sbjct: 55  DGEERCVACNLCAVACPVGCISLQKAEK--EDGRWYPEFFR---INFSRCIFCGMCEEAC 109

Query: 126 PQCAIDVEREVPERKSLVLGEITIKKDDCVLCG 158
           P  AI +  +  E    V  ++  +K+  ++ G
Sbjct: 110 PTTAIQLTPDF-ELGEYVRQDLVYEKEHLLISG 141



 Score = 47.0 bits (110), Expect = 4e-10
 Identities = 20/63 (31%), Positives = 30/63 (47%)

Query: 112 QSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAIEL 171
           + +CV C  C + CP   I +++   E          I    C+ CG+C E CP  AI+L
Sbjct: 57  EERCVACNLCAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQL 116

Query: 172 IPN 174
            P+
Sbjct: 117 TPD 119



 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 9/86 (10%)

Query: 130 IDVEREVPERKSLVLGEITIKKDD-----CVLCGICAEYCPADAIELIPNDMNALSLNPI 184
           +  E+ VP R     G I + +D      CV C +CA  CP   I L   +       P 
Sbjct: 34  VPAEQIVPPRYR---GRIILTRDPDGEERCVACNLCAVACPVGCISLQKAEKEDGRWYP- 89

Query: 185 ADIKIDLDACVYCKVCEKACPHNAIE 210
              +I+   C++C +CE+ACP  AI+
Sbjct: 90  EFFRINFSRCIFCGMCEEACPTTAIQ 115



 Score = 42.4 bits (98), Expect = 9e-09
 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 8/81 (9%)

Query: 253 PADAIEVEKPFEGELIID-----EPACNACGACISVCPCNALVFPQPEKQ-GDKVPNVV- 305
           PA+ I V   + G +I+      E  C AC  C   CP   +   + EK+ G   P    
Sbjct: 35  PAEQI-VPPRYRGRIILTRDPDGEERCVACNLCAVACPVGCISLQKAEKEDGRWYPEFFR 93

Query: 306 VNQDVCILCGACTHSCPVDAL 326
           +N   CI CG C  +CP  A+
Sbjct: 94  INFSRCIFCGMCEEACPTTAI 114



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 8/100 (8%)

Query: 210 EAICYKCPLASKIKKPELYGEIKGQTNID-KELCVSCGWCANICPADAIEVEKPFEGE-- 266
           + I Y    A +I  P   G I    + D +E CV+C  CA  CP   I ++K  + +  
Sbjct: 27  DTILYPEVPAEQIVPPRYRGRIILTRDPDGEERCVACNLCAVACPVGCISLQKAEKEDGR 86

Query: 267 -----LIIDEPACNACGACISVCPCNALVFPQPEKQGDKV 301
                  I+   C  CG C   CP  A+      + G+ V
Sbjct: 87  WYPEFFRINFSRCIFCGMCEEACPTTAIQLTPDFELGEYV 126



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 10/78 (12%)

Query: 192 DACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANI 251
           + CV C +C  ACP   I     K         PE +        I+   C+ CG C   
Sbjct: 58  ERCVACNLCAVACPVGCISL--QKAEKEDGRWYPEFF-------RINFSRCIFCGMCEEA 108

Query: 252 CPADAIEVEKPFE-GELI 268
           CP  AI++   FE GE +
Sbjct: 109 CPTTAIQLTPDFELGEYV 126



 Score = 38.1 bits (87), Expect = 2e-07
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 12/74 (16%)

Query: 32  CVGCGICSEICPTSAIEMGPLGAIFKGD----IDAPKLDISEKCVLCGMCACACPFDAVK 87
           CV C +C+  CP   I    L    K D     +  +++ S +C+ CGMC  ACP  A++
Sbjct: 60  CVACNLCAVACPVGCIS---LQKAEKEDGRWYPEFFRINFS-RCIFCGMCEEACPTTAIQ 115

Query: 88  LSINDKPITEMPQY 101
           L+    P  E+ +Y
Sbjct: 116 LT----PDFELGEY 125



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)

Query: 32  CVGCGICSEICPTSAIEMGP---LGAIFKGDI 60
           C+ CG+C E CPT+AI++ P   LG   + D+
Sbjct: 99  CIFCGMCEEACPTTAIQLTPDFELGEYVRQDL 130



 Score = 25.4 bits (54), Expect = 0.001
 Identities = 6/25 (24%), Positives = 16/25 (64%)

Query: 308 QDVCILCGACTHSCPVDALTVKRTK 332
           ++ C+ C  C  +CPV  +++++ +
Sbjct: 57  EERCVACNLCAVACPVGCISLQKAE 81