Pairwise Alignments

Query, 148 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 208 a.a., putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex from Escherichia coli BL21

 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)

Query: 92  ISIDMEKCIACGKCLE-CEYGAISVYSEDIGISIDREKCILCCKCVSECPVGALKIVK 148
           I++D ++CI C  C   C +   +V +E    S    KC+LC +C + CP GALKI++
Sbjct: 149 ITVDHKRCIGCSACTTACPWMMATVNTE----SKKSSKCVLCGECANACPTGALKIIE 202



 Score = 33.5 bits (75), Expect = 2e-06
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 6/45 (13%)

Query: 102 CGKCLE------CEYGAISVYSEDIGISIDREKCILCCKCVSECP 140
           C +C E      C  GAI+   ++  I++D ++CI C  C + CP
Sbjct: 123 CRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACP 167



 Score = 23.9 bits (50), Expect = 0.002
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%)

Query: 91  TISIDMEKCIACGKCLE-CEYGAISV 115
           T S    KC+ CG+C   C  GA+ +
Sbjct: 175 TESKKSSKCVLCGECANACPTGALKI 200