Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis S2

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score = 85.1 bits (209), Expect = 1e-21
 Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 15/253 (5%)

Query: 9   IILLFLLSISIISGCISSQNTMKRGTLTVGVCAQYPPTIYEE-NGNLAGFDFDLMNEIAK 67
           + LL  L++S+ S  + SQ   K   L +G+ A YPP  +++ +G++AGFD+D+ N + +
Sbjct: 4   LALLGALALSVFS--LVSQAAEK--PLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCE 59

Query: 68  RMNLNTDFKIYNSKSELFDALEKNEVDCI-GSRTVNYERRKFVDFTRVYYYDSVRVAVPE 126
            M     + +      L  AL+  ++D I  S ++  +R+K VDFT+ YY    R+ + +
Sbjct: 60  EMKTKCTW-VEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKD 118

Query: 127 SSSVT-LLKELKGKNLGVIEGSVSSELVESYLTNIGCKCLYYDTPENLTNAVENGEVDAV 185
            ++V+  L ELKGK +GV  GS+     +  L   G   + Y T   +   V  G +D  
Sbjct: 119 GTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGT 178

Query: 186 IGHEMYLEHISTKCNVQK-------RYLDEKLSVSYWAIPINKNNPNLRNSINDILLEME 238
           +     LE    K +  K        + D K       I + K +    + IN  +  + 
Sbjct: 179 VADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIR 238

Query: 239 NDGTLDELKLKWY 251
            +G   E++ K++
Sbjct: 239 ANGKYKEIESKYF 251