Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis S2

Subject, 257 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 16/255 (6%)

Query: 5   SIGIIILLFLLSISIISGCISSQNTMKRGTLTVGVCAQYPP-TIYEENGNLAGFDFDLMN 63
           S  ++  + + +IS++SG   +Q+      + +G    YPP    E +G L GFD D+  
Sbjct: 4   STRLLAAVSIAAISLLSGAALAQDK-----IVIGTEGAYPPFNNLEADGTLTGFDIDIAK 58

Query: 64  EIAKRMNLNTDFKIYNSKSELFDALEKNEVDCI-GSRTVNYERRKFVDFTRVYYYDSVRV 122
            + ++M     F + N    +  AL+  + D I  S ++  ER + VDF++ YY     +
Sbjct: 59  ALCEQMKAECTF-VTNDWDGIIPALQAKKFDAIIASMSITPERLQKVDFSKKYYNTPPAI 117

Query: 123 AVPESSSVTLLKELKGKNLGVIEGSVSSELVESYLTNIGCKCLYYDTPENLTNAVENGEV 182
           AVP+ S +  + +LKGK+LG    +  S   E +  +   K   Y T +     + NG +
Sbjct: 118 AVPKDSPIKSIDDLKGKSLGAQGSTTHSNYAEKHFPDADVK--MYPTADEYKLDIANGRI 175

Query: 183 DAVIGHEMYL-EHIST---KC--NVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDILLE 236
           DAVI   + L E + T   KC   +    +D +++ +   I + K +  L +     +  
Sbjct: 176 DAVIDDIVVLSEWLKTDAGKCCKILTPLKVDPEINGNGAGIAVRKGDTALADKFTAAIAG 235

Query: 237 MENDGTLDELKLKWY 251
           +   G   E+  K++
Sbjct: 236 IRASGKYQEINKKYF 250