Pairwise Alignments

Query, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 97.8 bits (242), Expect = 2e-25
 Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 1/203 (0%)

Query: 53  EDGELKGFDIDLMKEIANNMGLKPEFKIYEYGGAHEALLNGEIDCLPS-MTISPERKEDM 111
           +D ++ GFDID++  IA   GLK +     + G   AL NG++D + S +TI+ +RK+  
Sbjct: 46  KDKQIVGFDIDIINAIAKQQGLKIKIVNTPFTGIFGALNNGDVDLVISGVTINDKRKQSY 105

Query: 112 DFSRAYIQTYVVVAVFENSPYRELKDLNGKNIAVVTNTYTEDWAKEYLGSLNANIKSYDS 171
           DF+  Y     ++A+ +NS    LKDL GK IAVV+ +  +D A    G  + +I+ ++S
Sbjct: 106 DFTPPYFAARQLIALPKNSKVTSLKDLAGKKIAVVSASTADDIASREFGKTSPDIRRFES 165

Query: 172 VEGLVSDVYSGNIDAVVTDQIQLDYYSKQNNFESRLIFEKMTIEYWAIAVKKDNHNLQNE 231
              ++S++  G +DA + D   + Y   QN     +  +    E + I VKK +  L ++
Sbjct: 166 TPLIISELAGGGVDAAMGDNGVIAYRVAQNPDLKTIDDKSFPEEGFGIVVKKGDKALLDK 225

Query: 232 INDVLFELDENKALYELKNKWYD 254
           +   L  +  + +   +  KW++
Sbjct: 226 LTAGLAAIRADGSYVTIYKKWFN 248