Pairwise Alignments

Query, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 265 a.a., Diaminopimelate-binding protein / L-cystine-binding protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score = 86.3 bits (212), Expect = 6e-22
 Identities = 66/257 (25%), Positives = 127/257 (49%), Gaps = 12/257 (4%)

Query: 5   TILVIISSILILTSFSGCTSSYGKEYNTVNPGVLTVGITPEMPPQQYY-EDGELKGFDID 63
           T L     +++    +G   +  +     + G L VG+    PP  +  E G+L GF+++
Sbjct: 9   TFLFSAMGLMLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFEVE 68

Query: 64  LMKEIANNMGLKPEFKIYEYGGAHEALLNGEID-CLPSMTISPERKEDMDFSRAYIQTYV 122
             + +A  +G+K + +  ++ G   AL +  +D  +  +TIS ERK+  DFS  Y  + +
Sbjct: 69  FSEALAKELGVKAKIQPSKWDGILAALDSKRLDVVINQVTISDERKKKYDFSEPYTISGI 128

Query: 123 VVAVFENS--PYRELKDLNGKNIAVVTNTYTEDWAKEYLGSLNANIKSYDSVEGLVSDVY 180
              V + +    + +KDL+GK + V   T  E+W K  +   +A +K+YD     + D+ 
Sbjct: 129 QALVLKKNADTIKSVKDLSGKKVGVGLGTNYEEWLKANVP--DAIVKTYDDDPSKIQDLS 186

Query: 181 SGNIDAVVTDQI-QLDYYSKQNNFESRLI--FEKMTIEYWAIAVKKDNHNLQNEINDVLF 237
            G IDA++ D++  L+  +K  N   +L+   E  + +   IA++K    L   I+  + 
Sbjct: 187 VGRIDAILVDRLAALEMAAKTKN---KLVPAGEAFSRQASGIALRKGEPELLAAIDKAID 243

Query: 238 ELDENKALYELKNKWYD 254
           +L  +  L +L  K+++
Sbjct: 244 KLRADGTLKKLSEKYFN 260