Pairwise Alignments

Query, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 10/227 (4%)

Query: 38  LTVGITPEMPPQQYYE-DGELKGFDIDLMKEIANNMGLKPEFKIYEYGGAHEALLNGEID 96
           L +GI    PP  + + DG + GFD D+   +   M  K  +   E+ G   AL   +ID
Sbjct: 26  LKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEEMKTKCTWVEQEFDGLIPALKVRKID 85

Query: 97  C-LPSMTISPERKEDMDFSRAYIQTYVVVAVFENSPYRE-LKDLNGKNIAVVTNTYTEDW 154
             L SM+I+ +RK+ +DF++ Y  T   + + + +   + L +L GK I V   +  + +
Sbjct: 86  AILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGTTVSDSLDELKGKKIGVQRGSIHDRF 145

Query: 155 AKEYLGSLNANIKSYDSVEGLVSDVYSGNIDAVVTDQIQLDYYSKQNNFESRLIF----- 209
           AKE LG+  A +  Y +   +  DV +G +D  V D   L+    + +      F     
Sbjct: 146 AKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAF 205

Query: 210 --EKMTIEYWAIAVKKDNHNLQNEINDVLFELDENKALYELKNKWYD 254
              K   +   IAV+K +    + IN  +  +  N    E+++K+++
Sbjct: 206 TDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRANGKYKEIESKYFN 252