Pairwise Alignments

Query, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 257 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score = 91.7 bits (226), Expect = 1e-23
 Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 19/260 (7%)

Query: 3   IPTILVIISSILILTSFSGCTSSYGKEYNTVNPGVLTVGITPEMPPQQYYE-DGELKGFD 61
           I T L+   SI  ++  SG   +  K         + +G     PP    E DG L GFD
Sbjct: 3   ISTRLLAAVSIAAISLLSGAALAQDK---------IVIGTEGAYPPFNNLEADGTLTGFD 53

Query: 62  IDLMKEIANNMGLKPEFKIYEYGGAHEALLNGEIDCL-PSMTISPERKEDMDFSRAYIQT 120
           ID+ K +   M  +  F   ++ G   AL   + D +  SM+I+PER + +DFS+ Y  T
Sbjct: 54  IDIAKALCEQMKAECTFVTNDWDGIIPALQAKKFDAIIASMSITPERLQKVDFSKKYYNT 113

Query: 121 YVVVAVFENSPYRELKDLNGKNIAVVTNTYTEDWAKEYLGSLNANIKSYDSVEGLVSDVY 180
              +AV ++SP + + DL GK++    +T   ++A+++    +A++K Y + +    D+ 
Sbjct: 114 PPAIAVPKDSPIKSIDDLKGKSLGAQGSTTHSNYAEKHFP--DADVKMYPTADEYKLDIA 171

Query: 181 SGNIDAVVTDQIQLDYYSKQNNFESRLIFEKMTIE------YWAIAVKKDNHNLQNEIND 234
           +G IDAV+ D + L  + K +  +   I   + ++         IAV+K +  L ++   
Sbjct: 172 NGRIDAVIDDIVVLSEWLKTDAGKCCKILTPLKVDPEINGNGAGIAVRKGDTALADKFTA 231

Query: 235 VLFELDENKALYELKNKWYD 254
            +  +  +    E+  K++D
Sbjct: 232 AIAGIRASGKYQEINKKYFD 251