Pairwise Alignments

Query, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis S2

Subject, 352 a.a., recombinase RecA from Pseudomonas simiae WCS417

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 39/226 (17%)

Query: 74  RQSVWRLSTGSTELDTVLA-GGIESQSVTEFAGMFGSGKTQIMHQTCVNLQIREKIFADL 132
           RQ++  +STGS  LD  L  GG+    + E  G   SGKT +                 L
Sbjct: 33  RQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLT----------------L 76

Query: 133 EGVVEEELEAPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVARAYNSDMQMLFA 192
             + + +       ++D E    PE   ++    G++    +D+  V++    +  +   
Sbjct: 77  SVIAQAQKMGATCAFVDAEHALDPEYAGKL----GVN----VDDLLVSQPDTGEQAL--- 125

Query: 193 EKIEDLIKGGNNIKLVIIDSLTSTF-RNEFTGR------GKLAERQQKLGRHMATLNKLA 245
            +I D++   N I ++++DS+ +   + E  G       G  A    +  R +    K A
Sbjct: 126 -EITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNA 184

Query: 246 DLYNCIVLVTNQVAAKPDAYFGVAEQAIGGHVVGHAATFRFFLRKS 291
              NC+V+  NQ+  K    FG  E   GG+ +   A+ R  +R++
Sbjct: 185 ---NCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRT 227