Pairwise Alignments

Query, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis S2

Subject, 368 a.a., RecA protein from Variovorax sp. SCN45

 Score = 50.8 bits (120), Expect = 5e-11
 Identities = 65/271 (23%), Positives = 112/271 (41%), Gaps = 49/271 (18%)

Query: 44  ISEKAAAKMIMAARDLCDLGFKSGVELL----KQRQSVWRLSTGSTELDTVLA-GGIESQ 98
           ++    AK + AA    +  F  G  +     +  + +  +STGS  LD  L  GG+   
Sbjct: 12  VANSEKAKALQAALAQIEKQFGKGTIMRLGEGEALEDIQVVSTGSLGLDIALGVGGLPRG 71

Query: 99  SVTEFAGMFGSGKTQIMHQTCVNLQIREKIFADLEGVVEEELEAPKAVYIDTEGTFRPER 158
            V E  G   SGKT +  Q    +Q                 +A    ++D E       
Sbjct: 72  RVIEIYGPESSGKTTLTLQVIAAMQ----------------KQAGTCAFVDAEHALD--- 112

Query: 159 VVQMAEGAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIKGGNNIKLVIIDSLTS-TF 217
            VQ A+  G++    L +  +++    +  +   E ++ L++ G  + L+++DS+ + T 
Sbjct: 113 -VQYAQKLGVN----LSDLLISQPDTGEQAL---EIVDSLVRSGA-VDLIVVDSVAALTP 163

Query: 218 RNEFTGR------GKLAE-RQQKLGRHMATLNKLADLYNCIVLVTNQVAAKPDAYFGVAE 270
           + E  G       G  A    Q L +  AT+ K     NC+V+  NQ+  K    FG  E
Sbjct: 164 KAEIEGEMGDSLPGLQARLMSQALRKLTATIKKT----NCMVIFINQIRMKIGVMFGSPE 219

Query: 271 QAIGGHVVGHAATFRFFLRK----SKGDKRV 297
              GG+ +   A+ R  +R+     KGD+ +
Sbjct: 220 TTTGGNALKFYASVRLDIRRIGTIKKGDEAI 250